Miyakogusa Predicted Gene
- Lj0g3v0145499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0145499.1 Non Chatacterized Hit- tr|G7L7T8|G7L7T8_MEDTR
GMC-type oxidoreductase, putative OS=Medicago
truncatu,81.52,0,FAD/NAD(P)-binding domain,NULL; seg,NULL; no
description,NULL; GMC_oxred_N,Glucose-methanol-choline ,CUFF.8860.1
(2442 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65228 similar to UniRef100_A7QKN1 Cluster: Chromosome... 430 e-119
gnl|LJGI|TC77236 similar to UniRef100_A7QKN1 Cluster: Chromosome... 165 2e-39
gnl|LJGI|FS341683 similar to UniRef100_A7QKN1 Cluster: Chromosom... 60 7e-08
>gnl|LJGI|TC65228 similar to UniRef100_A7QKN1 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 1063
Score = 430 bits (217), Expect = e-119
Identities = 625/761 (82%)
Strand = Plus / Plus
Query: 1678 aacatagggagaaacttgcatcttcatccagtgacaatggcttggggctacttcccggat 1737
|||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 37 aacatagggaaaaacttgcatctccatccagtgacaatggcctggggctacttcccagac 96
Query: 1738 acgccttcacccgactcttggccagaggaacataagaaaagctatgaaggagggattatg 1797
||||| ||| || ||||| |||| | ||||||| ||||| ||||||||||| |||
Sbjct: 97 gcgcctgaacctgaggtgtggccggaggcatataagaagagctacgaaggagggataatg 156
Query: 1798 acagcaatgtccacagttgttgcagagtttgacaaatctggatatggtgcagtgatccaa 1857
||||||||||| | |||||||| |||||||| | |||||||| ||||| ||||||||
Sbjct: 157 acagcaatgtctcctgttgttgcggagtttgaagattctggatacggtgcggtgatccag 216
Query: 1858 acacctgcactacatcctggtatgttctcacttctcatgccatgggtttctggaaaggac 1917
||||||||| | |||||||| ||||||||| || |||||||||||||||||||| ||
Sbjct: 217 acacctgcattgcatcctgggatgttctcaattgtcatgccatgggtttctggagccgat 276
Query: 1918 ataaaagatcgaatgagcaaattctccagaacagctcatgtttttgcactggcaagggac 1977
|| ||||| |||||| | || || || |||||||||||||| |||||| ||||||||||
Sbjct: 277 atcaaagaacgaatgcggaagttttctagaacagctcatgtatttgcattggcaagggat 336
Query: 1978 caagggtcaggaactttgaattcaccaagctgtataagctatcagatgaaagatgcagac 2037
| || ||||| || || |||| | |||| || || ||||||||| || |||||||
Sbjct: 337 ctgggatcagggacagtgcattcgcgaagccacatcagttatcagatggaaaatgcagat 396
Query: 2038 gaagagagtttgcagaaaggaattgagaaggtactgagaatcctcgcagcggctggagct 2097
|||||| ||| ||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 397 gaagagcatttacagaatggaattgacaaggtgctgagaattctggcagcggctggagct 456
Query: 2098 gaagaaattgggacacataacaataagggaaggagcttaaatgttaagcaggtgagctat 2157
||||| ||||| || ||| | || ||||||| |||||| ||||| ||||| | || |
Sbjct: 457 gaagagattggaactcatcataacaagggaaagagcttgaatgtaaagcaagcaagtgtt 516
Query: 2158 catgaattcgagaagtttgtgaaagaagaaagctcaaggccaataacagacctttcaaca 2217
|||||| | ||||| ||| | ||||| ||||| ||||| || | ||||||||| ||||
Sbjct: 517 catgaacttgagaaatttatcaaagaggaaagtgcaaggtcactgacagaccttaaaaca 576
Query: 2218 ccaatatgctcagcacatcagatggggagttgtcggatgggaactaatccaaaggaatca 2277
||| | ||||| || |||||||||||||| || |||||||| ||||||| ||| | |||
Sbjct: 577 ccattgtgctcggcgcatcagatggggagctgccggatgggttctaatccgaagaattca 636
Query: 2278 gtggtgaaccagatgggggagacatgggaggtggagggtctttatctggcagacacgagt 2337
|||||||| |||| |||||||||||||| ||||||| ||||| ||||||| | |||
Sbjct: 637 gtggtgaatcagactggggagacatgggaagtggaggacctttacttggcagattcaagt 696
Query: 2338 gtctttcctacagctttgggtgtgaatccaatggtcactgttcaggctattgcttactgc 2397
|| || || |||||||||||||||||||||||| |||||||||| || ||||||||||||
Sbjct: 697 gttttccccacagctttgggtgtgaatccaatgatcactgttcaagcaattgcttactgc 756
Query: 2398 accgcacaacatgttctggaagttcttcaaaggaaaagaag 2438
|| |||||| |||||| ||| |||| |||||||||||||
Sbjct: 757 acagcacaatctgttcttcaagctcttaaaaggaaaagaag 797
>gnl|LJGI|TC77236 similar to UniRef100_A7QKN1 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 706
Score = 165 bits (83), Expect = 2e-39
Identities = 206/247 (83%)
Strand = Plus / Plus
Query: 905 aatgtgatgcagtggttgttggttctggctcaggaggtggtgtggtagctggagttctag 964
|||||||||||||||| |||||||| ||||||||||||||| || |||||||| |||| |
Sbjct: 455 aatgtgatgcagtggtggttggttccggctcaggaggtggtctgatagctggaattcttg 514
Query: 965 caaaagctggatacaaagtgctggtcttggagaaaggaagctatttcgcgaggaacaatc 1024
|||||||||| |||||||||||||| |||||||||| |||| || |||||||||
Sbjct: 515 caaaagctggttacaaagtgctggtaaaggagaaaggaggctacactgctcggaacaatc 574
Query: 1025 tttccttactggaaggaccaagcatggatcaaatgtacctctccaatggtttggttgcat 1084
|||| | || |||| ||| ||||||||||||||||||||||| |||| |||||||
Sbjct: 575 tttcgcttcttgaagcaccgagcatggatcaaatgtacctctctgggggttaggttgcaa 634
Query: 1085 cagatgatatggctgtgttaattctagcaggatccacagttggtggagggtctgcaatca 1144
| ||||| ||| || || || |||||||| ||||| || |||||||| ||||||||||
Sbjct: 635 ctgatgacatgagggtattcatactagcagggtccactgtaggtggaggctctgcaatca 694
Query: 1145 actggtc 1151
|||||||
Sbjct: 695 actggtc 701
Score = 56.0 bits (28), Expect = 1e-06
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 628 tcatggaatgcaattggatattgcggaacagatccagagttcaaagcacagttgaagaac 687
|||||||| ||||||||||| || ||| | |||||||| ||||| || ||||| ||||||
Sbjct: 190 tcatggaaggcaattggatactgtggacctgatccagaattcaaggctcagttaaagaac 249
Query: 688 catctttcacaa 699
||| ||| ||||
Sbjct: 250 cattttttacaa 261
>gnl|LJGI|FS341683 similar to UniRef100_A7QKN1 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 745
Score = 60.0 bits (30), Expect = 7e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 187 aactctctctctcctaggcagatgaagtccctcgtttctctctgtgacaccatcttacct 246
|||||||||||| | ||||||||||| || ||| | |||| ||||||||||||||||||
Sbjct: 249 aactctctctcttccaggcagatgaaatctctcactgctctttgtgacaccatcttacct 308
Query: 247 tc 248
||
Sbjct: 309 tc 310
Score = 60.0 bits (30), Expect = 7e-08
Identities = 104/128 (81%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 556 atgtttttcaggaccatcaagcttctcacgctcctaagcttctttactcagcaagatga- 614
||||| |||| |||| ||||||||||||| |||||| |||||| |||||| ||||||
Sbjct: 618 atgttcttcaagaccgtcaagcttctcactctcctagtcttcttctctcagctagatgaa 677
Query: 615 --aggagataacccatcatggaatgcaattggatattgcggaacagatccagagttcaaa 672
|| ||||||| |||||||| ||||||||||| || ||| | |||||||| |||||
Sbjct: 678 tcagaagataactgttcatggaaggcaattggatactgtggacctgatccagaattcaag 737
Query: 673 gcacagtt 680
|| |||||
Sbjct: 738 gctcagtt 745