Miyakogusa Predicted Gene
- Lj0g3v0145469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0145469.1 Non Chatacterized Hit- tr|I1MLZ0|I1MLZ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54170
PE,83.52,0,SUBFAMILY NOT NAMED,NULL; ADAPTIN,
ALPHA/GAMMA/EPSILON,NULL; seg,NULL; Adaptin_N,Clathrin/coatomer
a,CUFF.8902.1
(2916 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75734 similar to UniRef100_A7QKM8 Cluster: Chromosome... 1261 0.0
gnl|LJGI|AV414527 similar to UniRef100_A7QKM8 Cluster: Chromosom... 815 0.0
gnl|LJGI|TC79998 similar to UniRef100_A7QKM8 Cluster: Chromosome... 617 e-175
>gnl|LJGI|TC75734 similar to UniRef100_A7QKM8 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 748
Score = 1261 bits (636), Expect = 0.0
Identities = 733/752 (97%), Gaps = 10/752 (1%)
Strand = Plus / Plus
Query: 1206 taaaacctatatagcatctcgatgtgtagaacttgctgagcagtttgcaccaagcaatca 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 taaaacctatatagcatctcgatgtgtagaacttgctgagcagtttgcaccaagcaatca 61
Query: 1266 ttggtttatacagacaatgaataaagtttttgagcatgctggagatcttgtgaatatcaa 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttggtttatacagacaatgaataaagtttttgagcatgctggagatcttgtgaatatcaa 121
Query: 1326 ggtggcacataatttaatgcggttgattgctgaaggatttggagaggatgataatggtgc 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtggcacataatttaatgcggttgattgctgaaggatttggagaggatgataatggtgc 181
Query: 1386 agatagtcagttgagatcgtctgctg-ttgagtcgtatttacgcctaattggagagccga 1444
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 182 agatagtcaattgagatcgtctgctgtttgagtcgtatttacgcctaattggagagccga 241
Query: 1445 agcttccctctgtgtttcttcaagtcatctgctgggttttgggggaatatggcacatctg 1504
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 242 agcttccctctgtgtttcttcaagtcatctgctgggtgtagggggaatatggcacatctg 301
Query: 1505 atggtaaacattctgcttcctacatcactggg-aagttatgtgacgtagcagaggcatat 1563
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 302 atggtaaacattctgcttcctacatcactgggaaagttatgtgacgtagcagaggcatat 361
Query: 1564 tctaatgatgaaacggttaagggatatgcaatttcagcgatgacaaaaacttatgcattt 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tctaatgatgaaacggttaagggatatgcaatttcagcgatgacaaaaacttatgcattt 421
Query: 1624 gaaatagcagctgggaggaaggtggatatgctacctgagtgtcaatctttggttgaagaa 1683
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 422 gaaatagcagctgggaggaaggtggatatgctacctgagtgtcaatctgtggttgaagaa 481
Query: 1684 -ttattggcatccaac-tccac-tgacttgcagcaacgtgcttatgaattgcaagccctt 1740
||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 482 gttattggcatccaacgtccacgtgacttgcagcaacgtgcttatgaatcgcaagccctt 541
Query: 1741 attggtttggatgcacgagctgttgaatcaataatgccgcaagatgcaagttgtgaagat 1800
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 542 atgggtttggatgcacgagctgttgaatcaataatgccgcaagatgcaagtagtgaagat 601
Query: 1801 attgaggtggataaaaatctttctttcctcaatgattatgtccagcagtctctagaaagg 1860
|| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 602 atggaggtggat-aaaatctttctttcctcaatgattatgttcagcagtctctagaaa-g 659
Query: 1861 ggtgcgatgccctactttcgtgaggatgagcgggctggaatagtgaatataagcaacctc 1920
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 660 ggtgcgatgccctactttcgtgaggatgagcgggctggaatagtg-atat-agcaacctc 717
Query: 1921 agtagccaggatcagcatgaatctgcacagca 1952
||||||||||||||||||| ||||||||||||
Sbjct: 718 agtagccaggatcagcatg-atctgcacagca 748
>gnl|LJGI|AV414527 similar to UniRef100_A7QKM8 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 411
Score = 815 bits (411), Expect = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus
Query: 2213 aaaacccagtgaatgtggtgactaagacggatgttgctactgctgtaaattcaaaagtac 2272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaacccagtgaatgtggtgactaagacggatgttgctactgctgtaaattcaaaagtac 60
Query: 2273 gtgatagctatgattcaagaaagcaacatattgaaatttcaccagaaaagcagaagcttg 2332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgatagctatgattcaagaaagcaacatattgaaatttcaccagaaaagcagaagcttg 120
Query: 2333 ctgcttcattgtttggtggttccactaaacccgagaaaagaacatcaactagcaataagg 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgcttcattgtttggtggttccactaaacccgagaaaagaacatcaactagcaataagg 180
Query: 2393 ttccaaaggctagtgctagtgcttcagacagatctcaggaaccgaaagctgcagttttac 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccaaaggctagtgctagtgcttcagacagatctcaggaaccgaaagctgcagttttac 240
Query: 2453 ccaagaaaacagctgcagagaaaaccaatcaacaatctcctcttccagatttgcttgact 2512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaagaaaacagctgcagagaaaaccaatcaacaatctcctcttccagatttgcttgact 300
Query: 2513 tgggtgaaccaactgttactgctacagctccctctctggacccattcatgcaattggaag 2572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggtgaaccaactgttactgctacagctccctctctggacccattcatgcaattggaag 360
Query: 2573 gacttcttgacccaagccttagttctacaacaagtaatagtagtagtgctg 2623
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacttcttgacccaagccttagttctacaacaagtaatagtagtagtgctg 411
>gnl|LJGI|TC79998 similar to UniRef100_A7QKM8 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 1048
Score = 617 bits (311), Expect = e-175
Identities = 311/311 (100%)
Strand = Plus / Plus
Query: 2606 gtaatagtagtagtgctgctacaaatacacctgaccttatggaactctattcggaaacta 2665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtaatagtagtagtgctgctacaaatacacctgaccttatggaactctattcggaaacta 60
Query: 2666 ctgctagtggacagagtgatagtggtggctattctatcccccctgtgagtggggataatt 2725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgctagtggacagagtgatagtggtggctattctatcccccctgtgagtggggataatt 120
Query: 2726 taactcttttatctgagttgtcgaacgccactgcccgagataccaaaggagaaacaattg 2785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taactcttttatctgagttgtcgaacgccactgcccgagataccaaaggagaaacaattg 180
Query: 2786 caatgcctttgtcacaatccgtaaagggtccgaacgctaaagattctttgcagaaggatg 2845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatgcctttgtcacaatccgtaaagggtccgaacgctaaagattctttgcagaaggatg 240
Query: 2846 caaaagtcagacagatgggtgtcaacccctcaagtcagaatcccaacttgttcagggact 2905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaaagtcagacagatgggtgtcaacccctcaagtcagaatcccaacttgttcagggact 300
Query: 2906 tgcttggctaa 2916
|||||||||||
Sbjct: 301 tgcttggctaa 311