Miyakogusa Predicted Gene
- Lj0g3v0144389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0144389.1 tr|I7LZP3|I7LZP3_TETTS CAP-Gly domain containing
protein OS=Tetrahymena thermophila (strain SB210)
G,36.96,3e-18,Ubiquitin-like,NULL; seg,NULL; no description,NULL;
DYNACTIN 1-RELATED MICROTUBULE-BINDING,NULL,CUFF.8761.1
(531 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59883 similar to UniRef100_Q67XW4 Cluster: Tubulin fo... 948 0.0
gnl|LJGI|GO004870 similar to UniRef100_Q1EMP7 Cluster: Tubulin-f... 872 0.0
>gnl|LJGI|TC59883 similar to UniRef100_Q67XW4 Cluster: Tubulin folding cofactor B;
n=1; Arabidopsis thaliana|Rep: Tubulin folding cofactor
B - Arabidopsis thaliana (Mouse-ear cress), partial
(96%)
Length = 1315
Score = 948 bits (478), Expect = 0.0
Identities = 481/482 (99%)
Strand = Plus / Plus
Query: 1 atggcatcgagcttgcagaagattgatggggatgagactgtcctcttgcgtgtcactcat 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atggcgtcgagcttgcagaagattgatggggatgagactgtcctcttgcgtgtcactcat 326
Query: 61 tcaaatctcaaaactttcaaccctgacatccgcttctcgcttcagctgacagtggaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcaaatctcaaaactttcaaccctgacatccgcttctcgcttcagctgacagtggaagcc 386
Query: 121 gtgaaagaaaagctgtggaaaaaatgtggcacttccgtgaactcgatgcacctcgagctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgaaagaaaagctgtggaaaaaatgtggcacttccgtgaactcgatgcacctcgagctt 446
Query: 181 tacgacgacactcacgtcaaaatcactgatctcactgataactccaaaccccttggattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tacgacgacactcacgtcaaaatcactgatctcactgataactccaaaccccttggattc 506
Query: 241 tattcgcctctggatgggtttcgtttgcatgttgtggatcttgatccatcttctgttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tattcgcctctggatgggtttcgtttgcatgttgtggatcttgatccatcttctgttact 566
Query: 301 tccggtggatggctggaagatacttcattggtggaaaaataccaaatttctgaagaagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tccggtggatggctggaagatacttcattggtggaaaaataccaaatttctgaagaagcc 626
Query: 361 ttcaataaacgagaagggactttcagaaaatataaggagaaattgacttcccaaattcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttcaataaacgagaagggactttcagaaaatataaggagaaattgacttcccaaattcca 686
Query: 421 tcaaatgttgaagcaaagataccagacaactacatggaagacctctgtgttgatatcaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcaaatgttgaagcaaagataccagacaactacatggaagacctctgtgttgatatcaag 746
Query: 481 gt 482
||
Sbjct: 747 gt 748
>gnl|LJGI|GO004870 similar to UniRef100_Q1EMP7 Cluster: Tubulin-folding cofactor; n=1;
Plantago major|Rep: Tubulin-folding cofactor - Plantago
major (Common plantain), partial (86%)
Length = 779
Score = 872 bits (440), Expect = 0.0
Identities = 474/480 (98%), Gaps = 4/480 (0%)
Strand = Plus / Plus
Query: 1 atggcatcgagcttgcagaagattgatggggatgagactgtcctcttgcgtgtcactcat 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggcgtcgagcttgcagaagattgatggggatgagactgtcctcttgcgtgtcactcat 360
Query: 61 tcaaatctcaaaactttcaaccctgacatccgcttctcgcttcagctgacagtggaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaaatctcaaaactttcaaccctgacatccgcttctcgcttcagctgacagtggaagcc 420
Query: 121 gtgaaagaaaagctgtggaaaaaatgtggcacttccgtgaactcgatgcacctcgagctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgaaagaaaagctgtggaaaaaatgtggcacttccgtgaactcgatgcacctcgagctt 480
Query: 181 tacgacgacactcacgtcaaaatcactgatctcactgataactccaaaccccttggattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacgacgacactcacgtcaaaatcactgatctcactgataactccaaaccccttggattc 540
Query: 241 tattcgcctctggatgggtttcgtttgcatgttgtggatcttgatccatcttctgttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tattcgcctctggatgggtttcgtttgcatgttgtggatcttgatccatcttctgttact 600
Query: 301 tccggtggatggctggaagatacttcattggtggaaaaataccaaatttctgaagaagcc 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 601 tccggtggatggctggaagatacttcattggtgg-aaaataccaaatttctgaagaagcc 659
Query: 361 ttcaataaacgagaagggactttcagaaaatataaggagaaattgacttcccaaattcca 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 660 ttcaataaacgagaagggactttcagaaaatataaagagaaattgacttcccaaattcca 719
Query: 421 tcaaatgttgaagcaaagataccagacaactacatggaagacctctgtgttgatatcaag 480
||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 720 tcaaatgttgaagcaaagata-cagac-actacatggaagacctctgtg-tgatatcaag 776