Miyakogusa Predicted Gene

Lj0g3v0144089.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0144089.1 tr|F4JZL8|F4JZL8_ARATH Heavy metal
transport/detoxification domain-containing protein
OS=Arabidopsis,60,9e-19,CHLOROPLAST-TARGETED COPPER CHAPERONE,NULL;
COPPER TRANSPORT PROTEIN ATOX1-RELATED,NULL; seg,NULL; H,CUFF.8747.1
         (987 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP049843 homologue to UniRef100_Q9ZRE8 Cluster: ATFP2; ...   139   4e-32
gnl|LJGI|GO013158 similar to UniRef100_A7P3T9 Cluster: Chromosom...   117   1e-25

>gnl|LJGI|BP049843 homologue to UniRef100_Q9ZRE8 Cluster: ATFP2; n=1; Arabidopsis
           thaliana|Rep: ATFP2 - Arabidopsis thaliana (Mouse-ear
           cress), partial (5%)
          Length = 341

 Score =  139 bits (70), Expect = 4e-32
 Identities = 70/70 (100%)
 Strand = Plus / Minus

                                                                       
Query: 918 atcaccatcgttggttcccttcgagatcttcagtgatgaaaatgctaatggctgttctgt 977
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atcaccatcgttggttcccttcgagatcttcagtgatgaaaatgctaatggctgttctgt 282

                     
Query: 978 tatgtgatga 987
           ||||||||||
Sbjct: 281 tatgtgatga 272


>gnl|LJGI|GO013158 similar to UniRef100_A7P3T9 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 453

 Score =  117 bits (59), Expect = 1e-25
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                       
Query: 124 ggagttttcactacaacaatcgaccctcaacagcagaaagtaactgtcacaggaagtgtt 183
           ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||
Sbjct: 10  ggagttttcactacaacaatcaaccctcaacaccagaaagtgactgtcacaggaagcgtt 69

                          
Query: 184 ggtgttgagattctg 198
           |||||||||||||||
Sbjct: 70  ggtgttgagattctg 84