Miyakogusa Predicted Gene

Lj0g3v0143089.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0143089.1 Non Chatacterized Hit- tr|J3MXB6|J3MXB6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,32.43,1.6,seg,NULL,CUFF.8717.1
         (289 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP085762                                                     121   2e-27
gnl|LJGI|TC71641                                                       52   2e-06

>gnl|LJGI|BP085762 
          Length = 334

 Score =  121 bits (61), Expect = 2e-27
 Identities = 61/61 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttggaagcttacgcgatcagagtcagagtgaagcttggatacacagatcatcagaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgttggaagcttacgcgatcagagtcagagtgaagcttggatacacagatcatcagaac 333

            
Query: 61  t 61
           |
Sbjct: 334 t 334


>gnl|LJGI|TC71641 
          Length = 679

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 18  gatcagagtcagagtgaagcttggatacacagatcatcagaacttctgcttctggacc 75
           |||||||||||||| ||||||||||| | | || | ||  ||||||||||||||||||
Sbjct: 236 gatcagagtcagagggaagcttggatcctctgaccttcgtaacttctgcttctggacc 293