Miyakogusa Predicted Gene

Lj0g3v0142759.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0142759.1 Non Chatacterized Hit- tr|B9RD37|B9RD37_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,73.33,8e-16,FAMILY NOT NAMED,NULL,gene.g10837.t1.1
         (346 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79591 similar to UniRef100_A7PKF1 Cluster: Chromosome...   678   0.0  
gnl|LJGI|TC76023 similar to UniRef100_A7PKF1 Cluster: Chromosome...   167   6e-41
gnl|LJGI|AV777280 weakly similar to UniRef100_Q2QYQ2 Cluster: Ex...    50   9e-06

>gnl|LJGI|TC79591 similar to UniRef100_A7PKF1 Cluster: Chromosome chr15 scaffold_19,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_19, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 498

 Score =  678 bits (342), Expect = 0.0
 Identities = 345/346 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagaaataatagagtatattgaggaaacttattgggggtcaaagaaacgagttttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   atgtcagaaataatagagtatattgaggaaacttattgggggtcaaagaaacgagttttg 65

                                                                       
Query: 61  cttcttggtcatagcaaaggagtacatgcagcagctgctttatcattgtattggtatgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  cttcttggtcatagcaaaggagtacatgcagcagctgctttatcattgtattggtatgat 125

                                                                       
Query: 121 ttgaatgagattggcatagcccaaagtccttatggtggtacacctatagcacaaactcgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttgaatgagattggcatagcccaaagtccttatggtggtacacctatagcacaaactcgc 185

                                                                       
Query: 181 tatgatggtacacctatagcttctgttgtggtgggacctaagcaaaaaatggaccatgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tatgatggtacacctatagcttctgttgtggtgggacctaagcaaaaaatggaccatgct 245

                                                                       
Query: 241 tggacggtttacacacctctaaatgatgcatctcaggtgtgtgaggctctcttgtctcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tggacggtttacacacctctaaatgatgcatctcaggtgtgtgaggctctcttgtctcta 305

                                                         
Query: 301 cttgtagaaatggcagaacagagtcatgagcttgctataaaagatt 346
           |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 306 cttgtagaaatggcagaatagagtcatgagcttgctataaaagatt 351


>gnl|LJGI|TC76023 similar to UniRef100_A7PKF1 Cluster: Chromosome chr15 scaffold_19,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_19, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (53%)
          Length = 1056

 Score =  167 bits (84), Expect = 6e-41
 Identities = 107/114 (93%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                       
Query: 15  agagtatattgaggaaacttattgggggtcaaagaaacgagttttgcttcttggtcatag 74
           ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62  agagtatattgaggaaatttattgggggtcaaagaaacaagttttgcttcttggtcatag 121

                                                                 
Query: 75  caa---aggagtacatgcagcagctgctttatcattgtattggtatgatttgaa 125
           |||   ||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 122 caaaggaggagtagatgcagcagctgctttatcattgtattggtctgatttgaa 175



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                    
Query: 265 gatgcatctcaggtgtgtgaggctctcttgtctctacttgt 305
           |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 711 gatgcatctcaggtgtgtgaggctctcttgactctacttgt 751



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 167 tagcacaaactcgctatgatggtacacctatagcttctg 205
           ||||||||| || ||||| ||||||||||||||||||||
Sbjct: 199 tagcacaaagtccctatggtggtacacctatagcttctg 237


>gnl|LJGI|AV777280 weakly similar to UniRef100_Q2QYQ2 Cluster: Expressed protein; n=1;
           Oryza sativa Japonica Group|Rep: Expressed protein -
           Oryza sativa subsp. japonica (Rice), partial (7%)
          Length = 511

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 320 agagtcatgagcttgctataaaaga 344
           |||||||||||||||||||||||||
Sbjct: 175 agagtcatgagcttgctataaaaga 151