Miyakogusa Predicted Gene
- Lj0g3v0142579.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0142579.1 Non Chatacterized Hit- tr|B9T1T7|B9T1T7_RICCO
NOI, putative OS=Ricinus communis GN=RCOM_0691110
PE=4,70.89,2e-19,AvrRpt-cleavage,Pathogenic type III effector
avirulence factor Avr cleavage site,CUFF.8714.1
(237 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62870 similar to UniRef100_A7Q2Y2 Cluster: Chromosome... 428 e-120
gnl|LJGI|BW598477 homologue to UniRef100_O22633 Cluster: NOI pro... 293 2e-79
gnl|LJGI|GO023680 homologue to UniRef100_O22634 Cluster: NOI pro... 58 2e-08
>gnl|LJGI|TC62870 similar to UniRef100_A7Q2Y2 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 779
Score = 428 bits (216), Expect = e-120
Identities = 230/237 (97%)
Strand = Plus / Plus
Query: 1 atgtcggacaagggtcgtccactaccaaaatttggtgaatgggatgtcaatgatccggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atgtcggacaagggtcgtccactaccaaaatttggtgaatgggatgtcaatgatccggcc 276
Query: 61 tctgctgaggggttcacagtgattttcaataaggccagggatgnnnnnnngactggtggc 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 277 tctgctgaggggttcacagtgattttcaataaggccagggatgaaaaaaagactggtggc 336
Query: 121 tctgagtcaccaggaaagactgccactaaaactcaaagcaaacctgcattagatcctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tctgagtcaccaggaaagactgccactaaaactcaaagcaaacctgcattagatcctggc 396
Query: 181 aaacctcaaagtaaaaaatggttttgctgcgtaaaccctcctgcagaatcatagcca 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaacctcaaagtaaaaaatggttttgctgcgtaaaccctcctgcagaatcatagcca 453
>gnl|LJGI|BW598477 homologue to UniRef100_O22633 Cluster: NOI protein; n=1;
Arabidopsis thaliana|Rep: NOI protein - Arabidopsis
thaliana (Mouse-ear cress), partial (51%)
Length = 467
Score = 293 bits (148), Expect = 2e-79
Identities = 214/237 (90%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 1 atgtcggacaagggtcgtccactaccaaaatttggtgaatgggatgtcaatgatccggcc 60
||||||||| | || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 42 atgtcggacgaagggcgtccactaccaaaatttggtgaatgggatgtcaatgatcccgcc 101
Query: 61 tctgctgaggggttcacagtgattttcaataaggccagggatgnnnnnnngactggtggc 120
|||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 102 tctgctgaggggatcacagtgattttcaataacgccacggatgaaaaaaagactggtggc 161
Query: 121 tctgagtcaccaggaaagactgccactaaaactcaaagcaaacctgcattagatcctggc 180
||| | |||||| |||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 162 tctcactcaccatgaaagactgccactaaaactcata-caaacctgcattagatcctggc 220
Query: 181 aaacctcaaagtaaaaaatggttttgctgcgtaaaccctcctgcagaatcatagcca 237
||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 221 aaaccaccaagtaaaaaatggctttgctgcgtaaaccctcctgcataatcatagcca 277
>gnl|LJGI|GO023680 homologue to UniRef100_O22634 Cluster: NOI protein; n=2; Oryza
sativa|Rep: NOI protein - Oryza sativa (Rice), partial
(51%)
Length = 698
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 31 tttggtgaatgggatgtcaatgatccggcctctgctgaggggttcacagtgattttcaat 90
||||| ||||||||||| ||||| || || ||||||||||| |||||||| || |||||
Sbjct: 123 tttggggaatgggatgtgaatgaccctgcatctgctgagggattcacagttatcttcaac 182
Query: 91 aaggccagg 99
|| ||||||
Sbjct: 183 aaagccagg 191