Miyakogusa Predicted Gene
- Lj0g3v0141909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0141909.1 tr|G7LFI2|G7LFI2_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_8g063440 PE=4 SV=1,45.34,0,F-box domain,F-box
domain, cyclin-like; seg,NULL; FBA_1,F-box associated domain, type 1;
F_box_assoc,gene.g10792.t1.1
(1195 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO010439 similar to UniRef100_A2Q609 Cluster: Cyclin-li... 555 e-157
gnl|LJGI|TC77125 weakly similar to UniRef100_A2Q228 Cluster: Cyc... 486 e-136
>gnl|LJGI|GO010439 similar to UniRef100_A2Q609 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (18%)
Length = 736
Score = 555 bits (280), Expect = e-157
Identities = 479/545 (87%), Gaps = 9/545 (1%)
Strand = Plus / Plus
Query: 5 ccccttcaacaatggcgattcctgatgatgttgccttcactattttgtcaaaactgcctc 64
||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 26 ccccttcaacaatggcgattcctgatgatgtcgccttcacgattctgtcgaaactgcctc 85
Query: 65 tgaaatccctcaagcgattcacactggttcacaaatcatgggctgatttacttgaaatcc 124
||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 86 tgaaatctctcaagcgattcacactggttcacaaatcatgggttgatttacatgaaatcc 145
Query: 125 cttatttcatgaccatgttgtgcagcaaattggtatcgaaacatcaatcttattacgacg 184
|||||||||||| |||||| ||||||| || |||| |||||||||||||||||||| |
Sbjct: 146 cttatttcatgagcatgtttcgcagcaatttcttatccaaacatcaatcttattacgatg 205
Query: 185 atacatctcttcttctcttaaagcagaa---attagatggcacccattgtcacggtacat 241
|||||||||| ||| ||||| ||||| | || ||||||||||||||||| |||| |||
Sbjct: 206 atacatctctccttgtcttacagcagcagccatcagatggcacccattgtcccggttcat 265
Query: 242 tgtattcactttcaggtgacaagcttgagaaaacactcaaatcagattggcttccatatc 301
||| || ||||| |||||||| ||||||||||| ||| ||||||||||||||||||||
Sbjct: 266 tgtttttgctttctggtgacaattttgagaaaacagtcagatcagattggcttccatatc 325
Query: 302 aagagcatggcagattccatagtgtttcgggttccggtattcatggcattctttgtctcc 361
|||| ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 326 aagaacatggcagattccttagtgttttgggttcgggtattcatggcattctttgtctcc 385
Query: 362 acgaagcaccagaccgtgagtttgtattgtggaacccagctactcaggaattcatagcta 421
| ||||||||||| | ||| |||||||||||||||||||||| | ||||||| || ||
Sbjct: 386 atgaagcaccagattataagtatgtattgtggaacccagctactgaagaattcagagtta 445
Query: 422 ctcctcccagccctcgagagtctctacctgatctggaggcttatagtaaaattactactc 481
|||||||||||||| |||||||||||||| || ||||||||||| |||| |||
Sbjct: 446 ctcctcccagccctagagagtctctaccttattgggaggcttatattaaa------cctc 499
Query: 482 atggatttggttatgatcatgttacagatgactttaagatcgttcggcttataacttatt 541
|||||||||||||||||| | |||| |||||||||||| || |||||| |||||||| ||
Sbjct: 500 atggatttggttatgatcctattactgatgactttaaggtccttcggcatataacttttt 559
Query: 542 atcca 546
|||||
Sbjct: 560 atcca 564
Score = 63.9 bits (32), Expect = 2e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 625 cccttgtgggagatatatagcctaaaaagcaactattggaggaa 668
||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct: 693 cccttctgggagatatatagcctaagaagcaactcttggaggaa 736
>gnl|LJGI|TC77125 weakly similar to UniRef100_A2Q228 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago truncatula|Rep:
Cyclin-like F-box; F-box protein interaction domain -
Medicago truncatula (Barrel medic), partial (32%)
Length = 1362
Score = 486 bits (245), Expect = e-136
Identities = 496/579 (85%), Gaps = 18/579 (3%)
Strand = Plus / Plus
Query: 623 agcccttgtgggagatatatagcctaaaaagcaactattggaggaaacttgatgttgata 682
||||||| ||||| ||||||||||||| |||||||| |||||||||||| ||| |||||
Sbjct: 639 agcccttctgggaaatatatagcctaagaagcaactcttggaggaaactggatactgata 698
Query: 683 tgcctattattactggagacggtgctggcatgggttgtgacatttacatgaacggagtgt 742
|||||||||| ||| ||| | || ||||||| ||||||||||| |||||||||||
Sbjct: 699 tgcctattatc---ggaagtggttccggtatgggttatgacatttacacgaacggagtgt 755
Query: 743 gtcactgggtgggttacaatctgtcaaaggactatggttttgatacacatttggtgtcat 802
|||| ||| |||||| ||| ||| | |||||| || | | |||||| |||||
Sbjct: 756 gtcattggttgggtttgaat------aag---tgtggtttagaaatatatttggggtcat 806
Query: 803 tcaactttagcaaagagatattctatacaacgcccttaccgttagat------gatagaa 856
||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |
Sbjct: 807 tcaactttagcaatgagatattctacacaacgcccttaccgttagatctggctgatacag 866
Query: 857 aggtgcagaattacttggccgtgttaaatgagtccattgcgttgatatcaaaacatgaag 916
| |||||| |||||||| |||||||||||||||||||| |||||||||| ||||||||
Sbjct: 867 ggaagcagaactacttggcagtgttaaatgagtccattgcattgatatcaatacatgaag 926
Query: 917 aaacaacaactctagacatatggattttgggtgaactccgtgtgaaagaatcatggacta 976
||||||||||| | ||||||||||||||||||| ||| ||| || |||||||||||||
Sbjct: 927 aaacaacaacttttcacatatggattttgggtgagctctgtgcaaaggaatcatggacta 986
Query: 977 agcttttcactgttggacttggacccttgcatggctttggagttcctattggagtcggga 1036
| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 987 aacttttcactgttggacttggacccttgcatggctttgggcttcctattggagtaggga 1046
Query: 1037 agacaggcgatatattcttcagaaataaaaatggtgaactaggcttgtttgatttaagga 1096
||| |||||||||||||||||||| ||||||||||||||| |||||| |||||||| |
Sbjct: 1047 agatgggcgatatattcttcagaaaagaaaatggtgaactagccttgttcgatttaagta 1106
Query: 1097 cccagatgctcaaggagattgctgctacagagctggtagatcatgatcagataatattct 1156
| || ||||||||||||||||||||||||||| || |||| |||||||||||||| |||
Sbjct: 1107 ctcatatgctcaaggagattgctgctacagaggtgttagagtatgatcagataataatct 1166
Query: 1157 ataaggaaagcttttttccgattggaagaacaggttatt 1195
||||||||||| || ||||||||||||||||||||||||
Sbjct: 1167 ataaggaaagcattcttccgattggaagaacaggttatt 1205
Score = 424 bits (214), Expect = e-118
Identities = 445/524 (84%), Gaps = 21/524 (4%)
Strand = Plus / Plus
Query: 25 cctgatgatgttgccttcactattttgtcaaaactgcctctgaaatccctcaagcgattc 84
||||||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 2 cctgatgatgtcgccttcacgattctgtcgaaactgcctctgaaatccctcaagcgattc 61
Query: 85 acactggttcacaaatcatgggctgatttacttgaaatcccttatttcatgaccatgttg 144
|||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 62 acactggttcacaaatcatgggctgatttactcgaaatccctcatttcatga-------- 113
Query: 145 tgcagcaaattggtatcgaaacatcaatcttattacgacgatacatctcttcttctctta 204
||||||| ||||| |||||||| |||||| |||| ||||||||| | |||||||||
Sbjct: 114 ----gcaaattcgtatccaaacatcactcttatcacgatgatacatctttccttctctta 169
Query: 205 aagcagaa---attagatggcacccattgtcacggtacattgtattcactttcaggtgac 261
||||| | || |||| || ||||| ||||||| |||||||| ||||||||||||
Sbjct: 170 cagcagcagccatcagatttcatccattatcacggttcattgtatctgctttcaggtgac 229
Query: 262 aagcttgagaaaacactcaaatcagattggcttccatatcaagagcatggcagattccat 321
|| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |
Sbjct: 230 aaatttgagaaaacagtcaaatcagattcgcttccatatcaagagcatcgcagattcctt 289
Query: 322 agtgtttcgggttccggtattcatggcattctttgtctccacgaagcaccagaccgtgag 381
|| |||||||||||||||||||||||||||| ||||||||| |||| ||||||| | ||
Sbjct: 290 agggtttcgggttccggtattcatggcattcgttgtctccatgaagtaccagactataag 349
Query: 382 tttgtattgtggaacccagctactcaggaattcatagctactcctcccagccctcgagag 441
| |||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||
Sbjct: 350 tatgtattgtggaacccagctactaatgaattcagagttactcctcccagccctcgagag 409
Query: 442 tctctacctgatctggaggcttatagtaaaattactactcatggatttggttatgatcat 501
||| ||||| || || | | | ||||||||||||||||||||||||||||||
Sbjct: 410 tctgtaccttattatgatccatgt------attactactcatggatttggttatgatcat 463
Query: 502 gttacagatgactttaagatcgttcggcttataacttattatcc 545
||||| |||||||||||| || |||| | |||||| | ||||||
Sbjct: 464 gttaccgatgactttaaggtcattcgccatataacattttatcc 507