Miyakogusa Predicted Gene
- Lj0g3v0141689.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0141689.1 Non Chatacterized Hit- tr|H2RNJ0|H2RNJ0_TAKRU
Uncharacterized protein OS=Takifugu rubripes GN=CDC27
,47.67,2e-18,TPR_2,Tetratricopeptide TPR2; Tetratricopeptide
repeats,Tetratricopeptide repeat; HBT (HOBBIT), BIND,CUFF.8647.1
(1335 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343470 similar to UniRef100_A7PEI4 Cluster: Chromosom... 349 3e-95
gnl|LJGI|BP053302 similar to UniRef100_Q9SL81 Cluster: CDC27/NUC... 190 2e-47
gnl|LJGI|DC595233 homologue to UniRef100_A6BL28 Cluster: Cdc27B;... 64 2e-09
>gnl|LJGI|FS343470 similar to UniRef100_A7PEI4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 735
Score = 349 bits (176), Expect = 3e-95
Identities = 272/304 (89%)
Strand = Plus / Plus
Query: 5 ctcaatcccggtacttgtttgcactatcatgctttcgtatgaatcttcttagagaagctg 64
||||||||||||||||||||||| ||||||| |||| ||| |||||||||| |||||||
Sbjct: 284 ctcaatcccggtacttgtttgcaatatcatgttttcagatggatcttcttagtgaagctg 343
Query: 65 aagcagcattatgtcctgctaatgagccagctgtagaggtcccaaatggagcagctggtc 124
|||||||||||||||||| |||||||| || ||||||||||||||| ||||||||||
Sbjct: 344 aagcagcattatgtcctgtcaatgagcctagtgcagaggtcccaaatggtgcagctggtc 403
Query: 125 attatttattaggcatcatttacaggtatactgacagaaggacaaatgccatacatcatt 184
|| || ||||||| |||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 404 atcatctattagggctcatttacagatatactgacagaaggagaagtgccatacatcatt 463
Query: 185 ttaagcaggcactatcaatggatcccctaatgtgggctgcatatgaggagttgtgcaaat 244
||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||
Sbjct: 464 ttaagcaggcactattggtggatcctctaatgtgggcagcatatgaggagttgtgcatat 523
Query: 245 taggtgctgctgaagaagcagccgcagtttttggtgaagcagctgctttttgcatacaaa 304
|||| |||||||||||||| | |||||||||||||||||||||||| |||| |||||||
Sbjct: 524 taggcgctgctgaagaagctactgcagtttttggtgaagcagctgctctttgtatacaaa 583
Query: 305 agca 308
||||
Sbjct: 584 agca 587
>gnl|LJGI|BP053302 similar to UniRef100_Q9SL81 Cluster: CDC27/NUC2-like protein; n=1;
Arabidopsis thaliana|Rep: CDC27/NUC2-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 432
Score = 190 bits (96), Expect = 2e-47
Identities = 108/112 (96%)
Strand = Plus / Minus
Query: 1221 agcatactttgaattagttgattttgtagaagctgatcaagctttcagacttgctcgtca 1280
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 432 agcatactttgaattagttgattttgtagaagctgatccagctttcagacttgctcgtca 373
Query: 1281 gattacaccttatagttttgaaggaatggatatatactcaacagttctttat 1332
|||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 372 gattaccccttatagttttgaaggaatggatatatactccaccgttctttat 321
>gnl|LJGI|DC595233 homologue to UniRef100_A6BL28 Cluster: Cdc27B; n=1; Nicotiana
tabacum|Rep: Cdc27B - Nicotiana tabacum (Common tobacco),
partial (20%)
Length = 454
Score = 63.9 bits (32), Expect = 2e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1273 gctcgtcagattacaccttatagttttgaaggaatggatatatactcaacagttctttat 1332
||||||||||||| || |||||||| ||||||||||| ||||||||||||| ||||||
Sbjct: 1 gctcgtcagattatgccatatagtttggaaggaatggacgtatactcaacagtcctttat 60