Miyakogusa Predicted Gene
- Lj0g3v0141149.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0141149.1 Non Chatacterized Hit- tr|D7LA28|D7LA28_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,48.33,3e-18,
,CUFF.8619.1
(279 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76312 weakly similar to UniRef100_A7P2W5 Cluster: Chr... 521 e-148
gnl|LJGI|TC82046 weakly similar to UniRef100_A7P2W5 Cluster: Chr... 438 e-123
gnl|LJGI|BW594400 similar to UniRef100_A7P2W5 Cluster: Chromosom... 268 2e-71
>gnl|LJGI|TC76312 weakly similar to UniRef100_A7P2W5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 1408
Score = 521 bits (263), Expect = e-148
Identities = 275/279 (98%)
Strand = Plus / Plus
Query: 1 atggaggctttatgtgaggttttacattccaaacaaccacttattgtctattttccagat 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 649 atggaggctttatgtgaggttttacattccgaacaaccacttattgtctattttccagat 708
Query: 61 ggtttgcataaatcagttcctaagtcaatccaaagtgagttttttcaaaaggtccaagag 120
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 709 ggtttgcataaatcagttccgaagtcaatccaaagtgagttttttcacaaggtccaagag 768
Query: 121 aagtttgaactgctatctggccccatagtactgatttgtgggcaaaacaaagctcagtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aagtttgaactgctatctggccccatagtactgatttgtgggcaaaacaaagctcagtcg 828
Query: 181 aaaggacaactacttttttctatgaataaagggcaaaagacatcaaaagatggtgaattt 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 aaaggacaattacttttttctatgaataaagggcaaaagacatcaaaagatggtgaattt 888
Query: 241 tacaagccctttaatgtgttgtctatacagccacctaag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 889 tacaagccctttaatgtgttgtctatacagccacctaag 927
>gnl|LJGI|TC82046 weakly similar to UniRef100_A7P2W5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 558
Score = 438 bits (221), Expect = e-123
Identities = 230/233 (98%)
Strand = Plus / Plus
Query: 47 tctattttccagatggtttgcataaatcagttcctaagtcaatccaaagtgagttttttc 106
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tctattttccagatggtttgcataaatcaggtcctaagtcaatccaaagtgagttttttc 60
Query: 107 aaaaggtccaagagaagtttgaactgctatctggccccatagtactgatttgtgggcaaa 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaggtccaagagaagtttgaactgctatctggccccatagtactgatttgtgggcaaa 120
Query: 167 acaaagctcagtcgaaaggacaactacttttttctatgaataaagggcaaaagacatcaa 226
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accaagctcagtcgaaaggacaactacttttttctatgaataaagggcaaaagacatcaa 180
Query: 227 aagatggtgaattttacaagccctttaatgtgttgtctatacagccacctaag 279
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagatggtgaaatttacaagccctttaatgtgttgtctatacagccacctaag 233
>gnl|LJGI|BW594400 similar to UniRef100_A7P2W5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 480
Score = 268 bits (135), Expect = 2e-71
Identities = 243/279 (87%)
Strand = Plus / Plus
Query: 1 atggaggctttatgtgaggttttacattccaaacaaccacttattgtctattttccagat 60
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 103 atggaggctttatgtgaggttttgcattccaaacaacctcttattgtctattttccagac 162
Query: 61 ggtttgcataaatcagttcctaagtcaatccaaagtgagttttttcaaaaggtccaagag 120
|||| ||||||||||||||| ||||||| | |||||||||| |||| ||||| ||| ||
Sbjct: 163 agtttacataaatcagttcctgagtcaatgcgaagtgagtttattcacaaggtgcaaaag 222
Query: 121 aagtttgaactgctatctggccccatagtactgatttgtgggcaaaacaaagctcagtcg 180
| |||||| | | ||||||||||| |||| ||||||| |||||| | |||||||||
Sbjct: 223 atgtttgaccagttatctggccccgtagttttgatttgcgggcaatttgatgctcagtcg 282
Query: 181 aaaggacaactacttttttctatgaataaagggcaaaagacatcaaaagatggtgaattt 240
|| |||||| | |||||||||| ||| ||||||||||||||||||||||||||||| |
Sbjct: 283 aatggacaattccttttttctacaaatgaagggcaaaagacatcaaaagatggtgaaact 342
Query: 241 tacaagccctttaatgtgttgtctatacagccacctaag 279
||||| ||||||||||||||||||||||| ||||||||
Sbjct: 343 aacaaggcctttaatgtgttgtctatacagacacctaag 381