Miyakogusa Predicted Gene

Lj0g3v0141009.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0141009.1 NODE_58325_length_1108_cov_20.775270.path2.1
         (417 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76907 homologue to UniRef100_P15792 Cluster: Protein ...    90   1e-17
gnl|LJGI|TC80418 similar to UniRef100_Q41493 Cluster: Stpk1 prot...    56   2e-07

>gnl|LJGI|TC76907 homologue to UniRef100_P15792 Cluster: Protein kinase PVPK-1; n=1;
            Phaseolus vulgaris|Rep: Protein kinase PVPK-1 - Phaseolus
            vulgaris (Kidney bean) (French bean), partial (73%)
          Length = 2457

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                        
Query: 166  gccaggttttacgcggcggaagtgctggtggcattggagtatctacacatgctaggaatc 225
            ||||||||||||| ||||||||| ||  | || ||||||||  | |||||||| || |||
Sbjct: 1371 gccaggttttacgtggcggaagttctccttgctttggagtacttgcacatgctcgggatc 1430

                                                                        
Query: 226  atctacagagacctcaagccggagaacgtgttggtgagatcagacggtcacatcatgctc 285
            |||||||||||||| || || ||||| |||||||| |||  ||| |||||||| ||||||
Sbjct: 1431 atctacagagacctgaaacctgagaatgtgttggtaagagaagatggtcacataatgctc 1490

                             
Query: 286  tccgatttcgatctctc 302
            || || || ||||||||
Sbjct: 1491 tcagactttgatctctc 1507


>gnl|LJGI|TC80418 similar to UniRef100_Q41493 Cluster: Stpk1 protein kinase; n=1;
           Solanum tuberosum|Rep: Stpk1 protein kinase - Solanum
           tuberosum (Potato), partial (31%)
          Length = 595

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 199 ttggagtatctacacatgctaggaatcatctacagagacctcaagccggagaacgtgttg 258
           ||||||||| | |||||||  || ||||||||||||||||| || || || || || |||
Sbjct: 335 ttggagtatttgcacatgcctgggatcatctacagagaccttaaacccgaaaatgtattg 394

                                                       
Query: 259 gtgagatcagacggtcacatcatgctctccgatttcgatctctc 302
           |||| |  ||| ||||| || |||||||| ||||| ||||||||
Sbjct: 395 gtgacaaaagatggtcatataatgctctcagattttgatctctc 438