Miyakogusa Predicted Gene

Lj0g3v0140849.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0140849.2 Non Chatacterized Hit- tr|I3SRE7|I3SRE7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0.00000000000002, ,CUFF.8601.2
         (122 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS319026 similar to UniRef100_A7NUD9 Cluster: Chromosom...   242   4e-64
gnl|LJGI|TC79099 similar to UniRef100_A7NUD9 Cluster: Chromosome...   242   4e-64
gnl|LJGI|TC57888 similar to UniRef100_Q75LY2 Cluster: Expressed ...   105   6e-23

>gnl|LJGI|FS319026 similar to UniRef100_A7NUD9 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 736

 Score =  242 bits (122), Expect = 4e-64
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacattgctgctcttttaacttctgctggaattaatattgctgtgtgtgtagtgctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atggacattgctgctcttttaacttctgctggaattaatattgctgtgtgtgtagtgctc 443

                                                                       
Query: 61  ttttcattttactcagtgttaaggaaacagccgggtaatgttagtgtgtactttggacgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttcattttactcagtgttaaggaaacagccgggtaatgttagtgtgtactttggacgg 503

             
Query: 121 ag 122
           ||
Sbjct: 504 ag 505


>gnl|LJGI|TC79099 similar to UniRef100_A7NUD9 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 1553

 Score =  242 bits (122), Expect = 4e-64
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacattgctgctcttttaacttctgctggaattaatattgctgtgtgtgtagtgctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atggacattgctgctcttttaacttctgctggaattaatattgctgtgtgtgtagtgctc 193

                                                                       
Query: 61  ttttcattttactcagtgttaaggaaacagccgggtaatgttagtgtgtactttggacgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttttcattttactcagtgttaaggaaacagccgggtaatgttagtgtgtactttggacgg 253

             
Query: 121 ag 122
           ||
Sbjct: 254 ag 255


>gnl|LJGI|TC57888 similar to UniRef100_Q75LY2 Cluster: Expressed protein; n=2; Oryza
           sativa Japonica Group|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice), partial (6%)
          Length = 805

 Score =  105 bits (53), Expect = 6e-23
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   acattgctgctcttttaacttctgctggaattaatattgctgtgtgtgtagtgctctttt 64
           ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||
Sbjct: 417 acattgctgctcttttaacttctgctggagttaatattgctgtgtgcgtggtgctctttt 476

                                                                
Query: 65  cattttactcagtgttaaggaaacagccgggtaatgttagtgtgtactttgga 117
           || | || ||| | ||||||||||| ||    |||||||  ||||||||||||
Sbjct: 477 cactctattcaatattaaggaaacaacccaacaatgttaaagtgtactttgga 529