Miyakogusa Predicted Gene
- Lj0g3v0140629.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0140629.1 Non Chatacterized Hit- tr|C6TFP4|C6TFP4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54676 PE,87.8,0,no
description,NULL; NTF2-like,NULL; NTF2_DOMAIN,Nuclear transport factor
2, Eukaryote; NTF2,Nuclear,CUFF.8600.1
(372 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66098 737 0.0
gnl|LJGI|BW611573 589 e-168
gnl|LJGI|FS333198 similar to UniRef100_Q9C7F5 Cluster: Nuclear t... 375 e-103
gnl|LJGI|TC64995 similar to UniRef100_Q9C7F5 Cluster: Nuclear tr... 262 1e-69
gnl|LJGI|FS359717 similar to UniRef100_A5YU15 Cluster: Nuclear t... 101 3e-21
>gnl|LJGI|TC66098
Length = 711
Score = 737 bits (372), Expect = 0.0
Identities = 372/372 (100%)
Strand = Plus / Plus
Query: 1 atggatccagacgcgttagcaaaggcattcgtggagcactattactcaaccttcgattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atggatccagacgcgttagcaaaggcattcgtggagcactattactcaaccttcgattcc 164
Query: 61 aaccgtgctgctcttgctaatctctatcaggaaggttccatgctctctttcgaaggtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aaccgtgctgctcttgctaatctctatcaggaaggttccatgctctctttcgaaggtcaa 224
Query: 121 aagattcaaggttcttcaaacatcgtcgctaaactcacctctctccctttccaacagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aagattcaaggttcttcaaacatcgtcgctaaactcacctctctccctttccaacagtgt 284
Query: 181 catcattccatcaccaccgtcgattgccaaccctccggcgccacctccgccatgctcgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 catcattccatcaccaccgtcgattgccaaccctccggcgccacctccgccatgctcgtc 344
Query: 241 ttcgtcagcggtaacctccaactcgccggtgaacaacacgccctcaacttcagccagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttcgtcagcggtaacctccaactcgccggtgaacaacacgccctcaacttcagccagatg 404
Query: 301 ttccatttgatgccaacacagcagggaagctattatgtgttgaatgacatattccgtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttccatttgatgccaacacagcagggaagctattatgtgttgaatgacatattccgtttg 464
Query: 361 aactatgcatga 372
||||||||||||
Sbjct: 465 aactatgcatga 476
>gnl|LJGI|BW611573
Length = 448
Score = 589 bits (297), Expect = e-168
Identities = 297/297 (100%)
Strand = Plus / Plus
Query: 1 atggatccagacgcgttagcaaaggcattcgtggagcactattactcaaccttcgattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggatccagacgcgttagcaaaggcattcgtggagcactattactcaaccttcgattcc 146
Query: 61 aaccgtgctgctcttgctaatctctatcaggaaggttccatgctctctttcgaaggtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 aaccgtgctgctcttgctaatctctatcaggaaggttccatgctctctttcgaaggtcaa 206
Query: 121 aagattcaaggttcttcaaacatcgtcgctaaactcacctctctccctttccaacagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aagattcaaggttcttcaaacatcgtcgctaaactcacctctctccctttccaacagtgt 266
Query: 181 catcattccatcaccaccgtcgattgccaaccctccggcgccacctccgccatgctcgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 catcattccatcaccaccgtcgattgccaaccctccggcgccacctccgccatgctcgtc 326
Query: 241 ttcgtcagcggtaacctccaactcgccggtgaacaacacgccctcaacttcagccag 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcgtcagcggtaacctccaactcgccggtgaacaacacgccctcaacttcagccag 383
>gnl|LJGI|FS333198 similar to UniRef100_Q9C7F5 Cluster: Nuclear transport factor 2;
n=2; Arabidopsis thaliana|Rep: Nuclear transport factor
2 - Arabidopsis thaliana (Mouse-ear cress), partial
(74%)
Length = 744
Score = 375 bits (189), Expect = e-103
Identities = 234/249 (93%)
Strand = Plus / Plus
Query: 1 atggatccagacgcgttagcaaaggcattcgtggagcactattactcaaccttcgattcc 60
||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 404 atggatccagacgcgttggcaaaggcattcatggagcactattactcaaccttcaattcc 463
Query: 61 aaccgtgctgctcttgctaatctctatcaggaaggttccatgctctctttcgaaggtcaa 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aaccgtgctgctcttgccgatctctatcaggaaggttccatgctctctttcgaaggtcaa 523
Query: 121 aagattcaaggttcttcaaacatcgtcgctaaactcacctctctccctttccaacagtgt 180
||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||| |
Sbjct: 524 aaggttcaaggttctcaaaacatcgtcgctaaactcacttctctccccttccaacagcgc 583
Query: 181 catcattccatcaccaccgtcgattgccaaccctccggcgccacctccgccatgctcgtc 240
||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 584 catcactccatcaccaccgtcgattgccaaccctccggcgccaacgccgccatgctcgtc 643
Query: 241 ttcgtcagc 249
|||||||||
Sbjct: 644 ttcgtcagc 652
>gnl|LJGI|TC64995 similar to UniRef100_Q9C7F5 Cluster: Nuclear transport factor 2;
n=2; Arabidopsis thaliana|Rep: Nuclear transport factor
2 - Arabidopsis thaliana (Mouse-ear cress), partial
(98%)
Length = 775
Score = 262 bits (132), Expect = 1e-69
Identities = 309/368 (83%)
Strand = Plus / Plus
Query: 1 atggatccagacgcgttagcaaaggcattcgtggagcactattactcaaccttcgattcc 60
||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||| |
Sbjct: 49 atggatccagacgcgttggcaaaggcatttgtggagcactactacagcaccttcgacggc 108
Query: 61 aaccgtgctgctcttgctaatctctatcaggaaggttccatgctctctttcgaaggtcaa 120
|||||||| | || || |||||||| ||||||||||||||||| | ||||| |||||
Sbjct: 109 aaccgtgccggactggcgaatctctaccaggaaggttccatgctgaccttcgagggtcag 168
Query: 121 aagattcaaggttcttcaaacatcgtcgctaaactcacctctctccctttccaacagtgt 180
||||| ||||| || | ||||||||||| || |||||||| || || ||||| |||||
Sbjct: 169 aagatccaaggctccaccaacatcgtcgccaagctcacctcccttcccttccagcagtgc 228
Query: 181 catcattccatcaccaccgtcgattgccaaccctccggcgccacctccgccatgctcgtc 240
| || |||||| ||||||| || ||||| |||||||||| || | || ||||||||||
Sbjct: 229 ctccactccatctccaccgttgactgccagccctccggcgtcaacaacggcatgctcgtc 288
Query: 241 ttcgtcagcggtaacctccaactcgccggtgaacaacacgccctcaacttcagccagatg 300
|||||||||||||| |||||||||||||| || || ||||||||||| ||||||||||||
Sbjct: 289 ttcgtcagcggtaatctccaactcgccggcgagcagcacgccctcaagttcagccagatg 348
Query: 301 ttccatttgatgccaacacagcagggaagctattatgtgttgaatgacatattccgtttg 360
||||||||||| ||||||| ||| ||||||||||| || |||||||| | |||||| ||
Sbjct: 349 ttccatttgataccaacaccgcaaggaagctattacgtattgaatgatgtcttccgtctg 408
Query: 361 aactatgc 368
|| |||||
Sbjct: 409 aattatgc 416
>gnl|LJGI|FS359717 similar to UniRef100_A5YU15 Cluster: Nuclear transport factor 2;
n=1; Panax ginseng|Rep: Nuclear transport factor 2 -
Panax ginseng (Korean ginseng), partial (37%)
Length = 288
Score = 101 bits (51), Expect = 3e-21
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 113 aaggtcaaaagattcaaggttcttcaaacatcgtcgctaaactcacctctctccctttcc 172
||||||||||| ||||||||| | |||||| |||||||||||||| | | |||| ||||
Sbjct: 288 aaggtcaaaaggttcaaggttttcaaaacattgtcgctaaactcacttttttccccttcc 229
Query: 173 aacagtgtcatcattccatcaccaccgtcgattgccaaccctccggcgcca 223
||||| | ||||| ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 228 aacagggccatcactccatcacccccgtggattgccaaccctccggggcca 178