Miyakogusa Predicted Gene
- Lj0g3v0140559.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0140559.3 Non Chatacterized Hit- tr|I1JH16|I1JH16_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,76.99,0,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL;
ANTIGEN MLAA-22-RELATED,NULL; Apt1,FMP27, C-t,CUFF.8587.3
(5505 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB828576 similar to UniRef100_A7NUK2 Cluster: Chromosom... 1051 0.0
gnl|LJGI|AV778273 similar to UniRef100_A7NUK3 Cluster: Chromosom... 222 2e-56
>gnl|LJGI|CB828576 similar to UniRef100_A7NUK2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 534
Score = 1051 bits (530), Expect = 0.0
Identities = 533/534 (99%)
Strand = Plus / Plus
Query: 1350 aaagcgcttaggtggccttaaagaaaacgcagcctgttcccttttcagtgctactgacat 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagcgcttaggtggccttaaagaaaacgcagcctgttcccttttcagtgctactgacat 60
Query: 1410 tacaatgaggtgggagcctgatgtacatctttcgttaattgaacttgttctccagctgaa 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacaatgaggtgggagcctgatgtacatctttcgttaattgaacttgttctccagctgaa 120
Query: 1470 attaatggtacacaaaaggaagcttcaggagcgtggtaatgaacatgtggaggatatgaa 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaatggtacacaaaaggaagcttcaggagcgtggtaatgaacatgtggaggatatgaa 180
Query: 1530 aaatgaagcaactatggaatcaaggaatcttgaaaagaagaaagaatctatttttgctgt 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgaagcaactatggaatcaaggaatcttgaaaagaagaaagaatctatttttgctgt 240
Query: 1590 tgatgtggaaatgttaaatatatctgctgagctaggagatggagttgatgctatggttca 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatgtggaaatgttaaatatatctgctgagctaggagatggagttgatgctatggttca 300
Query: 1650 ggtgcagtcaattttctctgagaatgctcgtataggagtgctacttgaaggacttatgct 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtgcagtcaattttctctgagaatgctcgtataggagtgctacttgaaggacttatgct 360
Query: 1710 tagttttagtggggcaagaattttcaagagtagtcggatgcaaatttcacgagttcctag 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagttttagtggggcaagaattttcaagagtagtcggatgcaaatttcacgagttcctag 420
Query: 1770 tatatctgctagttcatctgatgcaaacggacctgtagccacaacatgggattgggtaat 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatatctgctagttcatctgatgcaaacggacctgtagccacaacatgggattgggtaat 480
Query: 1830 tcaaggtcttgacgttcacatttgtttgccatacagattgcaattgcgtgctat 1883
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaaggtcttgatgttcacatttgtttgccatacagattgcaattgcgtgctat 534
>gnl|LJGI|AV778273 similar to UniRef100_A7NUK3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 595
Score = 222 bits (112), Expect = 2e-56
Identities = 268/320 (83%)
Strand = Plus / Minus
Query: 4627 gggactcggcacttcatggttaatgttattgaaccgcagtttaatcttcactcagaggat 4686
||||| || ||||||||||| ||||||||||| || |||| |||||||||||| ||||||
Sbjct: 360 gggacccgacacttcatggtgaatgttattgagccacagtctaatcttcactccgaggat 301
Query: 4687 gcaaatggtaggttcttgcttgctgcaagaagttgccgcattttagcccagtcatttcat 4746
|||||||||||||| |||||||||| ||| |||| ||||||| | || ||||||
Sbjct: 300 gcaaatggtaggtttctgcttgctgctgtaagcggccgtgttttagctcgatcgtttcat 241
Query: 4747 tcagtccttcatgttggctatgagatgattgagcaaacagacagtactacaaatgtacat 4806
||||||||||| ||||| |||||||||||||||||| || |||||||| | ||||||
Sbjct: 240 tcagtccttcaagttggttatgagatgattgagcaagcacttggtactacagacgtacat 181
Query: 4807 actggtgaataccagcccgaaatcgcatggaaaagaatggagttgtctgttatgttggag 4866
| |||||||||| || ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 180 ataagtgaataccaacctgaaatgacatggaaaagaatggagttctctgttatgttggag 121
Query: 4867 cacgtgcaggcccatgtcgcgccaacagatgttgatctaggggctggggtgcagtggcta 4926
|| || || || ||||| || || ||||||||||||| ||| ||||| | ||||||||
Sbjct: 120 catgtacaagctcatgttgcacctacagatgttgatccaggagctggactacagtggctt 61
Query: 4927 ccgaaaattcttagaggctc 4946
||||||||||| ||| ||||
Sbjct: 60 ccgaaaattctcagaagctc 41