Miyakogusa Predicted Gene
- Lj0g3v0140499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0140499.1 gene.g10657.t1.1
(1014 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW594341 weakly similar to UniRef100_A7QH77 Cluster: Ch... 151 1e-35
gnl|LJGI|TC63385 weakly similar to UniRef100_Q8L7T0 Cluster: AT4... 145 6e-34
gnl|LJGI|TC81373 similar to UniRef100_A7PSR1 Cluster: Chromosome... 143 2e-33
gnl|LJGI|FS330439 weakly similar to UniRef100_A7PSR1 Cluster: Ch... 135 6e-31
gnl|LJGI|TC64546 weakly similar to UniRef100_A7P9F5 Cluster: Chr... 103 2e-21
gnl|LJGI|TC81578 weakly similar to UniRef100_Q9LVD3 Cluster: Sal... 101 8e-21
gnl|LJGI|BP042555 72 7e-12
gnl|LJGI|AV409767 weakly similar to UniRef100_Q0DEH2 Cluster: Os... 66 5e-10
gnl|LJGI|FS328368 weakly similar to UniRef100_Q9FIX3 Cluster: Gb... 56 4e-07
gnl|LJGI|TC58745 52 7e-06
>gnl|LJGI|BW594341 weakly similar to UniRef100_A7QH77 Cluster: Chromosome chr18
scaffold_96, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 458
Score = 151 bits (76), Expect = 1e-35
Identities = 175/208 (84%)
Strand = Plus / Plus
Query: 749 ccttttcaccgtctcttgttacatacaacgctcttattcatgggctttgctttttccaga 808
||||||| || ||||||||||||||||| || ||||||||||| ||||||| || ||
Sbjct: 41 ccttttcgccatctcttgttacatacaatgcacttattcatggctattgctttctcggga 100
Query: 809 ggcctgacgaggctctggagattttgaggggcatgcctgagatgctcttggaccctgatg 868
||| | | ||||| |||| ||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 101 ggcttcaggaggcgctggggattttgaggggcatgcctcagatgggattgtcccctgatg 160
Query: 869 aagttagttatagcgctgttatatccgggtttcgccgaatccgggagctgcggaaggcgt 928
|||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||| |
Sbjct: 161 gtgttagttataacgctgttatatccgcgttatgccgaatccgggagctggggaaggcct 220
Query: 929 ttgaattgaagctggagatggatcaaaa 956
|||| |||||| | ||||||||| ||||
Sbjct: 221 ttgatttgaagtttgagatggatgaaaa 248
>gnl|LJGI|TC63385 weakly similar to UniRef100_Q8L7T0 Cluster: AT4g28010/T13J8_120; n=1;
Arabidopsis thaliana|Rep: AT4g28010/T13J8_120 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 1001
Score = 145 bits (73), Expect = 6e-34
Identities = 157/185 (84%)
Strand = Plus / Plus
Query: 661 gcttattgtcttaaaggtgaattcagtaaggtttttcatctgcaggatgaagtcatacaa 720
|||||||||||| |||||||||||||| || ||||||| |||| |||||| | | |||
Sbjct: 817 gcttattgtcttgtaggtgaattcagtatggcttttcatttgcatgatgaaatgagacac 876
Query: 721 aagggttttttgccttattatgttacttccttttcaccgtctcttgttacatacaacgct 780
| ||||||||||||| ||| ||||| | |||||||| ||||||||||||| ||||||
Sbjct: 877 aggggttttttgcctgattttgttattcagttttcaccatctcttgttacattcaacgcc 936
Query: 781 cttattcatgggctttgctttttccagaggcctgacgaggctctggagattttgaggggc 840
||||||||||||||||||| ||| ||||| |||||||||||||| |||||||| |||
Sbjct: 937 cttattcatgggctttgctctttggagagggttgacgaggctctgggtattttgagaggc 996
Query: 841 atgcc 845
|||||
Sbjct: 997 atgcc 1001
Score = 69.9 bits (35), Expect = 3e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 273 tgttgagctttatcatcagatgtgtgtcagggagttgagtcccaacgagaccacttaca 331
||||||||||||| |||||||| |||| |||| ||||||||||||||||| |||||||
Sbjct: 327 tgttgagctttatgatcagatgcgtgtgagggggttgagtcccaacgagaggacttaca 385
Score = 58.0 bits (29), Expect = 1e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 364 agggttgaggaggctgtggggattttgaggctcatggctgagaagggtttgtcccct 420
||||||||| ||||| |||||||||| || ||||||||||| |||||||||||||
Sbjct: 520 agggttgagcaggctttggggatttttagtgccatggctgagaggggtttgtcccct 576
>gnl|LJGI|TC81373 similar to UniRef100_A7PSR1 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 663
Score = 143 bits (72), Expect = 2e-33
Identities = 216/264 (81%)
Strand = Plus / Plus
Query: 682 ttcagtaaggtttttcatctgcaggatgaagtcatacaaaagggttttttgccttattat 741
|||||||||| ||||||| |||| |||||| | | ||| ||||||||||||||| || |
Sbjct: 298 ttcagtaaggcttttcatttgcaagatgaaatgacacacaagggttttttgcctggtttt 357
Query: 742 gttacttccttttcaccgtctcttgttacatacaacgctcttattcatgggctttgcttt 801
|||||| ||||| ||||||| ||||||||||||||| ||||| |||| ||||||||
Sbjct: 358 gttactgggttttcgccgtctcatgttacatacaacgccattatttatggcctttgctta 417
Query: 802 ttccagaggcctgacgaggctctggagattttgaggggcatgcctgagatgctcttggac 861
|| || |||| |||||||||| | |||||||||||||||||||||| ||| |
Sbjct: 418 ttgggccgggctgaggaggctctgggggttttgaggggcatgcctgagatcgggttgtcc 477
Query: 862 cctgatgaagttagttatagcgctgttatatccgggtttcgccgaatccgggagctgcgg 921
||||||| ||||||||| || ||||||||| |||||| ||||||||||||||| ||
Sbjct: 478 cctgatgctgttagttattgcactgttatattagggttttgccgaatccgggagccaggg 537
Query: 922 aaggcgtttgaattgaagctggag 945
||||||| ||| |||||| |||||
Sbjct: 538 aaggcgtatgagttgaaggtggag 561
>gnl|LJGI|FS330439 weakly similar to UniRef100_A7PSR1 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 742
Score = 135 bits (68), Expect = 6e-31
Identities = 161/192 (83%)
Strand = Plus / Plus
Query: 661 gcttattgtcttaaaggtgaattcagtaaggtttttcatctgcaggatgaagtcatacaa 720
|||| ||||||| |||||||||||||||||| ||||||| |||| || | | |||||
Sbjct: 501 gcttgttgtcttgaaggtgaattcagtaaggcttttcatatgcatcatcagatgatacac 560
Query: 721 aagggttttttgccttattatgttacttccttttcaccgtctcttgttacatacaacgct 780
|||||| |||||||| ||| ||||||| ||||| ||| ||||| |||||||||||||
Sbjct: 561 aagggtgttttgcctgattttgttactgggttttcgccggctctttttacatacaacgcg 620
Query: 781 cttattcatgggctttgctttttccagaggcctgacgaggctctggagattttgaggggc 840
||||||| |||||||||||||| |||| ||| ||||| |||| |||||||||||||
Sbjct: 621 attattcacgggctttgctttttagggagggttgaggaggccctggggattttgaggggc 680
Query: 841 atgcctgagatg 852
||||||||||||
Sbjct: 681 atgcctgagatg 692
Score = 73.8 bits (37), Expect = 2e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 364 agggttgaggaggctgtggggattttgaggctcatggctgagaagggtttgtcccctcat 423
|||||||||||||| |||||||||||||| |||| |||||| ||||||||||||| |
Sbjct: 648 agggttgaggaggccctggggattttgaggggcatgcctgagatgggtttgtcccctgac 707
Query: 424 gctgatagttata 436
|||| ||||||||
Sbjct: 708 gctgttagttata 720
Score = 60.0 bits (30), Expect = 3e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 364 agggttgaggaggctgtggggattttgaggctcatggctgagaagggtttgtcccctcat 423
||||||||| ||| ||| |||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 213 agggttgagaagggtgttgggattttgaggggtatggctgagaagggtttatcccctgat 272
Query: 424 gc 425
||
Sbjct: 273 gc 274
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 920 ggaaggcgtttgaattgaagctggagatggatcaaaa 956
||||||||| |||||| ||||||||||||||||||||
Sbjct: 325 ggaaggcgtatgaattcaagctggagatggatcaaaa 361
>gnl|LJGI|TC64546 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 877
Score = 103 bits (52), Expect = 2e-21
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 364 agggttgaggaggctgtggggattttgaggctcatggctgagaagggtttgtcccctcat 423
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 564 agggttgaggaggctgtggggattttgaggggcatggctgagaggggtttgtcccctgat 623
Query: 424 gctgatagttatagcaggattatatcccggttttgc 459
| || |||||||| || |||||||| ||||||||
Sbjct: 624 gttgttagttataccactattatatctgggttttgc 659
>gnl|LJGI|TC81578 weakly similar to UniRef100_Q9LVD3 Cluster: Salt-inducible
protein-like; n=2; Arabidopsis thaliana|Rep:
Salt-inducible protein-like - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 669
Score = 101 bits (51), Expect = 8e-21
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 364 agggttgaggaggctgtggggattttgaggctcatggctgagaagggtttgtcccctcat 423
||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||| ||
Sbjct: 459 agggttgagaaggctgtggggattttgagggtcatggctaagaggggtttgtcccctgat 518
Query: 424 gctgatagttatagcaggattatatcccggttttg 458
|||| |||||||| || |||||||| |||||||
Sbjct: 519 gctgttagttataccactgttatatccgggttttg 553
>gnl|LJGI|BP042555
Length = 497
Score = 71.9 bits (36), Expect = 7e-12
Identities = 128/159 (80%)
Strand = Plus / Plus
Query: 371 aggaggctgtggggattttgaggctcatggctgagaagggtttgtcccctcatgctgata 430
||||||||||||||||||||||| |||||| ||| ||||| ||||||| ||| |||||
Sbjct: 327 aggaggctgtggggattttgagggatatggctaagaggggttngtcccctgatgttgata 386
Query: 431 gttatagcaggattatatcccggttttgcaaaaacaaggagatgggtaaggccttggaaa 490
|||| | |||||| | |||||||| ||| | | || |||||||||| || ||||
Sbjct: 387 cttattaccctcttatatgcgggttttgccaaaccgggaagctgggtaaggcgtttgaaa 446
Query: 491 tgaaggtagagatgcttgacaagggcatctttcctgatg 529
|||||| ||||| || ||||||||||||| |||||||
Sbjct: 447 tgaaggccaagatggttcacaagggcatcttgcctgatg 485
>gnl|LJGI|AV409767 weakly similar to UniRef100_Q0DEH2 Cluster: Os06g0152500 protein;
n=1; Oryza sativa Japonica Group|Rep: Os06g0152500
protein - Oryza sativa subsp. japonica (Rice), partial
(6%)
Length = 411
Score = 65.9 bits (33), Expect = 5e-10
Identities = 107/131 (81%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 661 gcttattgtcttaaaggtgaattcagtaaggtttttcatctgcaggatgaagtcatacaa 720
|||||||||||| |||||||||||||||||||| | || |||| ||| || | |||||
Sbjct: 255 gcttattgtcttggaggtgaattcagtaaggtttctaatttgcatgatcaaatgatacac 314
Query: 721 aagggttttttgccttattatgttacttccttttcaccgtctcttgttacatacaacgct 780
|| ||| |||||||| ||| ||||| || || |||||||||||||||||||| ||
Sbjct: 315 aatggtgttttgcctgattttgtta---ccgggtcgccgtctcttgttacatacaatgca 371
Query: 781 cttattcatgg 791
|||||| ||||
Sbjct: 372 cttatttatgg 382
>gnl|LJGI|FS328368 weakly similar to UniRef100_Q9FIX3 Cluster: Gb|AAD30619.1; n=1;
Arabidopsis thaliana|Rep: Gb|AAD30619.1 - Arabidopsis
thaliana, partial (7%)
Length = 779
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 186 ccctgattgtgtcacttacaacaccttgatca 217
|||||||| |||||||||||||||||||||||
Sbjct: 557 ccctgattctgtcacttacaacaccttgatca 588
>gnl|LJGI|TC58745
Length = 782
Score = 52.0 bits (26), Expect = 7e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 373 gaggctgtggggattttgaggctcatggctgagaagggtttgtcccctcatgct 426
|||||| ||| |||||||||| ||||||||||| |||||| |||| |||||||
Sbjct: 648 gaggctttggtgattttgagggacatggctgagaggggtttctcccttcatgct 701