Miyakogusa Predicted Gene
- Lj0g3v0140219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0140219.1 Non Chatacterized Hit- tr|C5Y4B4|C5Y4B4_SORBI
Putative uncharacterized protein Sb05g021440
OS=Sorghu,35.44,3e-18,seg,NULL; coiled-coil,NULL; Transpos_assoc,NULL;
Transposase_24,Transposase, Ptta/En/Spm, plant,CUFF.8567.1
(2472 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80988 weakly similar to UniRef100_Q6CBU0 Cluster: Yar... 295 7e-79
gnl|LJGI|FS344145 homologue to UniRef100_A5D257 Cluster: Unchara... 151 2e-35
gnl|LJGI|TC69556 similar to UniRef100_P87179 Cluster: Cell wall ... 105 1e-21
gnl|LJGI|TC61725 similar to UniRef100_A0LSH8 Cluster: Glycoside ... 105 1e-21
>gnl|LJGI|TC80988 weakly similar to UniRef100_Q6CBU0 Cluster: Yarrowia lipolytica
chromosome C of strain CLIB122 of Yarrowia lipolytica;
n=1; Yarrowia lipolytica|Rep: Yarrowia lipolytica
chromosome C of strain CLIB122 of Yarrowia lipolytica -
Yarrowia lipolytica (Candida lipolytica), partial (5%)
Length = 638
Score = 295 bits (149), Expect = 7e-79
Identities = 242/273 (88%)
Strand = Plus / Minus
Query: 2078 gtaaggttcattgctatggaagaaccgtcacaccatctatgtttaaaagaaaagaagaaa 2137
|||| |||| ||||| ||||| ||| ||||||| || ||||||||||||| |||||||
Sbjct: 638 gtaaagttcgttgctttggaaaaactctcacacctactgtgtttaaaagaaatgaagaaa 579
Query: 2138 ttgctgctattaagaaacaacactctaatgaaatgactagcgttaagagggagatggaag 2197
|||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||
Sbjct: 578 ttgctgctatcaagaaacaacactctgatgaaatgactagtgtgaagagggagatggaag 519
Query: 2198 gattgaaaatgcttgtgaagagcttgttgttgcaacaaaacccaaacttcgatgaagagg 2257
|||| ||| | ||||| |||||||||||| ||||||||||||||| || ||||||| ||
Sbjct: 518 gattaaaatttcttgtaaagagcttgttgaagcaacaaaacccaaattttgatgaagggg 459
Query: 2258 aggtgaatgatataatgggaactgctttaggcaatgaaaatagtgcaactccgcattcat 2317
||||||||| |||||||| ||||||||||||||||||||| | ||| ||||| |||||||
Sbjct: 458 aggtgaatggtataatggcaactgctttaggcaatgaaaaaaatgctactccacattcat 399
Query: 2318 ctacatcgaaccatgttcgtcatcctgaaaagt 2350
|||||||||||||||||| ||||| ||||||||
Sbjct: 398 ctacatcgaaccatgttcctcatcgtgaaaagt 366
>gnl|LJGI|FS344145 homologue to UniRef100_A5D257 Cluster: Uncharacterized conserved
protein; n=1; Pelotomaculum thermopropionicum SI|Rep:
Uncharacterized conserved protein - Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI),
partial (6%)
Length = 647
Score = 151 bits (76), Expect = 2e-35
Identities = 148/172 (86%)
Strand = Plus / Plus
Query: 63 atttttagattttgcctacactaaaggaagacctcagggagatgagattttatgtccttg 122
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 358 atttttagactttgcctacactaaaggaagacctcaaggagatgagattttatgtccttg 417
Query: 123 tactaagtgtagaaattgctgttggactacaagaaatgtggttgcagatcatctaatagc 182
| | |||||||||||| ||||||||| | |||||||||| | |||||| | ||||
Sbjct: 418 tgccaagtgtagaaatcactgttggacaaaaagaaatgtgatattggatcatttggtagc 477
Query: 183 caagggttttctaaaaggttatgatgtttgggtccatcatggggagccaata 234
|| | |||||||| || ||||||||||||||||| |||||||||| ||||
Sbjct: 478 taacgactttctaaagggatatgatgtttgggtccaccatggggagcaaata 529
>gnl|LJGI|TC69556 similar to UniRef100_P87179 Cluster: Cell wall integrity and stress
response component 1 precursor; n=2; Schizosaccharomyces
pombe|Rep: Cell wall integrity and stress response
component 1 precursor - Schizosaccharomyces pombe
(Fission yeast), partial (7%)
Length = 993
Score = 105 bits (53), Expect = 1e-21
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 2348 agtgtgcggaggaaggagacactcctcaaggtttagaagaagagtgtgaggac 2400
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agtgtgcggaggaaggagacactcctcaaggtttagaagaagagtgtgaggac 226
>gnl|LJGI|TC61725 similar to UniRef100_A0LSH8 Cluster: Glycoside hydrolase, family 6
precursor; n=1; Acidothermus cellulolyticus 11B|Rep:
Glycoside hydrolase, family 6 precursor - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B), partial (3%)
Length = 1119
Score = 105 bits (53), Expect = 1e-21
Identities = 209/261 (80%)
Strand = Plus / Plus
Query: 1893 gcgtgcaacgaaggaaaatggagaggaagttacgcaacctgaaatgttcgttgcgactcg 1952
|||||||| |||||||||| ||| || |||| ||| ||||||||||| || ||| ||
Sbjct: 311 gcgtgcaaaaaaggaaaatgaagatgatgttagccaagctgaaatgttcattatgacccg 370
Query: 1953 ccaaagccgaaaaggaaaagaagtggacaaggaaacgcaaagtgtaattcctaaacttca 2012
|||||||||||||||||| ||||||| ||||||| |||| || |||| ||| |||||
Sbjct: 371 tcaaagccgaaaaggaaaacaagtggatgaggaaacacaaactgcaattgctattcttca 430
Query: 2013 agattctgttaagaactcaagtgaatctgagacatttcaatcattgttcggcaaagaaaa 2072
|||||| || ||||||||| |||||||||||| ||| | || ||||| || || |||||
Sbjct: 431 agattccattcagaactcaaatgaatctgagacgtttaagtctttgtttgggaaggaaaa 490
Query: 2073 gtctggtaaggttcattgctatggaagaaccgtcacaccatctatgtttaaaagaaaaga 2132
|||||| |||| ||||| |||||||| | |||||||| ||| | |||| || ||
Sbjct: 491 atctggtcgagttcgctgctacggaagaacattaacaccatccatgatgaaaaagaatga 550
Query: 2133 agaaattgctgctattaagaa 2153
||||||| ||| ||||||||
Sbjct: 551 agaaatttatgcaattaagaa 571