Miyakogusa Predicted Gene
- Lj0g3v0139989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0139989.1 tr|Q8L692|Q8L692_MEDTR 1-Deoxy-D-xylulose
5-phosphate synthase 2 (Precursor) OS=Medicago truncatula
,86.31,0,TRANSKETOLASE_1,Transketolase, N-terminal;
TRANSKETOLASE_2,Transketolase binding site; dxs: 1-deoxy-,CUFF.8527.1
(1932 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58045 homologue to UniRef100_Q8L692 Cluster: 1-deoxy-... 1600 0.0
gnl|LJGI|AV767242 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D... 632 e-180
gnl|LJGI|TC67900 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 476 e-133
gnl|LJGI|GO020915 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D... 319 4e-86
gnl|LJGI|TC64910 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 307 1e-82
gnl|LJGI|TC71272 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 226 4e-58
gnl|LJGI|TC62963 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 76 9e-13
>gnl|LJGI|TC58045 homologue to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose
5-phosphate synthase 2 precursor; n=1; Medicago
truncatula|Rep: 1-deoxy-D-xylulose 5-phosphate synthase
2 precursor - Medicago truncatula (Barrel medic),
partial (32%)
Length = 831
Score = 1600 bits (807), Expect = 0.0
Identities = 807/807 (100%)
Strand = Plus / Plus
Query: 1 atggccttctgtagtaccttcgtgaagcccaaccattcggccctttccccaagccacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atggccttctgtagtaccttcgtgaagcccaaccattcggccctttccccaagccacata 84
Query: 61 cacaaagctccaactccaaaccatggttgcagaacacagttttgtgtaagagcttcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cacaaagctccaactccaaaccatggttgcagaacacagttttgtgtaagagcttcagca 144
Query: 121 actggtgcaggtgatggggaaaggactattatgaagaaacaaaaagatgggtgggagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 actggtgcaggtgatggggaaaggactattatgaagaaacaaaaagatgggtgggagatc 204
Query: 181 aatttctctagtgagaaaccactaacacccttgttggatacagttaattaccctgttcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aatttctctagtgagaaaccactaacacccttgttggatacagttaattaccctgttcac 264
Query: 241 atgaagaacttgtccacacaggatcttgaacaactggcagcagagctgagagtagacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgaagaacttgtccacacaggatcttgaacaactggcagcagagctgagagtagacatt 324
Query: 301 gtacactctgtttcaaatactggtgggcatcttagctcaagcttgggggtggtggagtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtacactctgtttcaaatactggtgggcatcttagctcaagcttgggggtggtggagtta 384
Query: 361 gcagtggctctgcatcatgttttcaatacccctgaagacaagatcatatgggatgttggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagtggctctgcatcatgttttcaatacccctgaagacaagatcatatgggatgttggc 444
Query: 421 catcaagcataccctcacaagattctcacaggtagaaggtcccgcatgcacacaattagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catcaagcataccctcacaagattctcacaggtagaaggtcccgcatgcacacaattagg 504
Query: 481 aagacatcagggctagcaggctttccgaaaagggatgagagcattcatgatgcttttggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagacatcagggctagcaggctttccgaaaagggatgagagcattcatgatgcttttggg 564
Query: 541 gcaggacacagttctacaagcatatcagctggtcttggcatggcagttgcaagggatcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcaggacacagttctacaagcatatcagctggtcttggcatggcagttgcaagggatcta 624
Query: 601 ttgggaaataaaaacagtgtaatttcagtgattggagatggagcaatgactgcagggcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgggaaataaaaacagtgtaatttcagtgattggagatggagcaatgactgcagggcag 684
Query: 661 gcttatgaggccatgaacaatgcaggattccttgatactaacttgatagttgtacttaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcttatgaggccatgaacaatgcaggattccttgatactaacttgatagttgtacttaat 744
Query: 721 gataacaagcaagtctctttgccaactgcaacacttgatggccctgcaactccagttgga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gataacaagcaagtctctttgccaactgcaacacttgatggccctgcaactccagttgga 804
Query: 781 gccatcagtagtactttaagcaaactt 807
|||||||||||||||||||||||||||
Sbjct: 805 gccatcagtagtactttaagcaaactt 831
>gnl|LJGI|AV767242 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (15%)
Length = 319
Score = 632 bits (319), Expect = e-180
Identities = 319/319 (100%)
Strand = Plus / Plus
Query: 945 ttttgaggagctcgggttatactacatcggccctgtggatggtcataatgttgaagattt 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttgaggagctcgggttatactacatcggccctgtggatggtcataatgttgaagattt 60
Query: 1005 agtcaccatttttgagaaagtgaaagcaacgcctgccccaggtccagttttgattcatat 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtcaccatttttgagaaagtgaaagcaacgcctgccccaggtccagttttgattcatat 120
Query: 1065 tgtgacagaaaaagggaagggataccccccagctgaaggagcagatgataaaatgcatgg 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgacagaaaaagggaagggataccccccagctgaaggagcagatgataaaatgcatgg 180
Query: 1125 tgttgtgaagtttgatccaaaaacgggtcgccagtttaagccaaaaccctccacactttc 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttgtgaagtttgatccaaaaacgggtcgccagtttaagccaaaaccctccacactttc 240
Query: 1185 atacacccagtactttgctgaatctttgataaaggaagctgaaatcgacaacaagatagt 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atacacccagtactttgctgaatctttgataaaggaagctgaaatcgacaacaagatagt 300
Query: 1245 agctattcacgcagcaatg 1263
|||||||||||||||||||
Sbjct: 301 agctattcacgcagcaatg 319
>gnl|LJGI|TC67900 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (32%)
Length = 824
Score = 476 bits (240), Expect = e-133
Identities = 573/684 (83%)
Strand = Plus / Plus
Query: 75 tccaaaccatggttgcagaacacagttttgtgtaagagcttcagcaactggtgcaggtga 134
|||||| |||| | ||| || |||||| ||||| ||||||||||| | | | | | |||
Sbjct: 141 tccaaagcatgatagcataaaacagttctgtgtgagagcttcagctagtagcaccgatga 200
Query: 135 tggggaaaggactattatgaagaaacaaaaagatgggtgggagatcaatttctctagtga 194
|||||||||||| ||||| | |||| | ||||||| |||| ||||||| | ||| || |
Sbjct: 201 tggggaaaggacaattataaggaaagagaaagatgagtggaagatcaaatactcaagcaa 260
Query: 195 gaaaccactaacacccttgttggatacagttaattaccctgttcacatgaagaacttgtc 254
||||||| |||| || ||| |||| ||| | || ||||| | ||| |||||||| | ||
Sbjct: 261 gaaaccagtaacccctttgctggacacaatcaactacccagctcatatgaagaatctttc 320
Query: 255 cacacaggatcttgaacaactggcagcagagctgagagtagacattgtacactctgtttc 314
||||||||||||||||||||| || |||||||| || | ||||||||||||| |||||||
Sbjct: 321 cacacaggatcttgaacaacttgctgcagagctaagggcagacattgtacacactgtttc 380
Query: 315 aaatactggtgggcatcttagctcaagcttgggggtggtggagttagcagtggctctgca 374
|| ||||||||||||||||||||||||| || || ||||| ||| |||||||||||||
Sbjct: 381 caactctggtgggcatcttagctcaagcttaggagtagtggaattaacagtggctctgca 440
Query: 375 tcatgttttcaatacccctgaagacaagatcatatgggatgttggccatcaagcataccc 434
|||||||||||| ||||| ||||||||||| ||||||||||| || || || ||||| |
Sbjct: 441 tcatgttttcaacaccccagaagacaagattatatgggatgtggggcaccaggcatatgc 500
Query: 435 tcacaagattctcacaggtagaaggtcccgcatgcacacaattaggaagacatcagggct 494
|||||||||||||||||||||||||| | |||| ||| |||||||| || | || ||
Sbjct: 501 acacaagattctcacaggtagaaggtctaggatgcccactattaggaaaaccttgggact 560
Query: 495 agcaggctttccgaaaagggatgagagcattcatgatgcttttggggcaggacacagttc 554
|||||||||||| || || || || ||| | ||||||||||||||| |||| || |||||
Sbjct: 561 agcaggctttcctaagagagacgaaagcgtacatgatgcttttgggacagggcatagttc 620
Query: 555 tacaagcatatcagctggtcttggcatggcagttgcaagggatctattgggaaataaaaa 614
|||||| ||||| |||||||||||||||||||||||||||||| || | ||||| || ||
Sbjct: 621 tacaagtatatctgctggtcttggcatggcagttgcaagggatatactaggaaagaacaa 680
Query: 615 cagtgtaatttcagtgattggagatggagcaatgactgcagggcaggcttatgaggccat 674
|||||| || |||||||| |||||||| |||||||| || || || |||||||| ||| |
Sbjct: 681 cagtgtcatctcagtgatcggagatggggcaatgaccgctggccaagcttatgaagccct 740
Query: 675 gaacaatgcaggattccttgatactaacttgatagttgtacttaatgataacaagcaagt 734
||||||||||||||||||||| |||| |||||||| ||||||| || |||||||||||
Sbjct: 741 gaacaatgcaggattccttgactgtaacatgatagttatacttaacgacaacaagcaagt 800
Query: 735 ctctttgccaactgcaacacttga 758
|||||| |||||||| ||| ||||
Sbjct: 801 ctctttaccaactgctacagttga 824
>gnl|LJGI|GO020915 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (15%)
Length = 330
Score = 319 bits (161), Expect = 4e-86
Identities = 284/325 (87%)
Strand = Plus / Plus
Query: 267 tgaacaactggcagcagagctgagagtagacattgtacactctgtttcaaatactggtgg 326
|||| |||| ||||||||||| |||| ||| |||||||| || | ||||| | ||||||
Sbjct: 1 tgaaaaacttgcagcagagctaagagcagatcttgtacacactctgtcaaacattggtgg 60
Query: 327 gcatcttagctcaagcttgggggtggtggagttagcagtggctctgcatcatgttttcaa 386
|||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||||
Sbjct: 61 gcatcttagctcaagcttgggggtggtggaattaacagttgctctgcattatgttttcag 120
Query: 387 tacccctgaagacaagatcatatgggatgttggccatcaagcataccctcacaagattct 446
||||| || ||||||||| | ||||||||||| ||||| |||||| | |||||||||||
Sbjct: 121 caccccagacgacaagatcctttgggatgttgggcatcaggcatacgcccacaagattct 180
Query: 447 cacaggtagaaggtcccgcatgcacacaattaggaagacatcagggctagcaggctttcc 506
|||||||||||||| | |||||||| |||| || ||| |||||||||||||| |||||
Sbjct: 181 tacaggtagaaggtcactaatgcacaccattaagatgacttcagggctagcaggttttcc 240
Query: 507 gaaaagggatgagagcattcatgatgcttttggggcaggacacagttctacaagcatatc 566
|||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||
Sbjct: 241 taaaagggatgagagcattcatgatgcttttggagtaggacatagttctacaagcatatc 300
Query: 567 agctggtcttggcatggcagttgca 591
|||||||| |||| ||||||||||
Sbjct: 301 tgctggtctgggcacggcagttgca 325
>gnl|LJGI|TC64910 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (17%)
Length = 654
Score = 307 bits (155), Expect = 1e-82
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1776 agttcaaaattgccatcatgctgcaaaaatgcttagcgcaataggaattgatgttaccgt 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttcaaaattgccatcatgctgcaaaaatgcttagcgcaataggaattgatgttaccgt 60
Query: 1836 tgctgatgctaggttctgcaaacctttggatactgatctcattaagctactagctaaaga 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctgatgctaggttctgcaaacctttggatactgatctcattaagctactagctaaaga 120
Query: 1896 gcatgaaatactaatcacagtggaggaaggttcta 1930
|||||||||||||||||||||||||||||||||||
Sbjct: 121 gcatgaaatactaatcacagtggaggaaggttcta 155
>gnl|LJGI|TC71272 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (16%)
Length = 963
Score = 226 bits (114), Expect = 4e-58
Identities = 285/342 (83%)
Strand = Plus / Plus
Query: 75 tccaaaccatggttgcagaacacagttttgtgtaagagcttcagcaactggtgcaggtga 134
|||||| |||| | ||| || |||||| ||||| ||||||||||| | | | | | |||
Sbjct: 141 tccaaagcatgatagcataaaacagttctgtgtgagagcttcagctagtagcaccgatga 200
Query: 135 tggggaaaggactattatgaagaaacaaaaagatgggtgggagatcaatttctctagtga 194
|||||||||||| ||||| | |||| | ||||||| |||| ||||||| | ||| || |
Sbjct: 201 tggggaaaggacaattataaggaaagagaaagatgagtggaagatcaaatactcaagcaa 260
Query: 195 gaaaccactaacacccttgttggatacagttaattaccctgttcacatgaagaacttgtc 254
||||||| |||| || ||| |||| ||| | || ||||| | ||| |||||||| | ||
Sbjct: 261 gaaaccagtaacccctttgctggacacaatcaactacccagctcatatgaagaatctttc 320
Query: 255 cacacaggatcttgaacaactggcagcagagctgagagtagacattgtacactctgtttc 314
||||||||||||||||||||| || |||||||| || | ||||||||||||| |||||||
Sbjct: 321 cacacaggatcttgaacaacttgctgcagagctaagggcagacattgtacacactgtttc 380
Query: 315 aaatactggtgggcatcttagctcaagcttgggggtggtggagttagcagtggctctgca 374
|| ||||||||||||||||||||||||| || || ||||| ||| |||||||||||||
Sbjct: 381 caactctggtgggcatcttagctcaagcttaggagtagtggaattaacagtggctctgca 440
Query: 375 tcatgttttcaatacccctgaagacaagatcatatgggatgt 416
|||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 441 tcatgttttcaacaccccagaagacaagattatatgggatgt 482
>gnl|LJGI|TC62963 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (17%)
Length = 702
Score = 75.8 bits (38), Expect = 9e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 1837 gctgatgctaggttctgcaaacctttggatactgatctcattaagctactagctaaagag 1896
|||||||| ||||| |||||||| ||||||| |||||||||||||||| | ||||| |||
Sbjct: 91 gctgatgcaaggttttgcaaacccttggatattgatctcattaagctattggctaaggag 150
Query: 1897 catgaaatactaatcacagtggaggaaggttcta 1930
|| || | | ||||||||||| ||||||||||
Sbjct: 151 cacgagtttgtcatcacagtggaagaaggttcta 184