Miyakogusa Predicted Gene

Lj0g3v0139579.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0139579.1 Non Chatacterized Hit- tr|I3SP01|I3SP01_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.98,0,TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED,NULL;
RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM,NULL;,CUFF.8508.1
         (360 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62739 similar to UniRef100_A7PD82 Cluster: Chromosome...   575   e-164
gnl|LJGI|TC73157 similar to UniRef100_A7PD82 Cluster: Chromosome...   151   3e-36
gnl|LJGI|TC72429 similar to UniRef100_A7Q2K3 Cluster: Chromosome...    64   6e-10

>gnl|LJGI|TC62739 similar to UniRef100_A7PD82 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (52%)
          Length = 994

 Score =  575 bits (290), Expect = e-164
 Identities = 293/294 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgctactgccaccggcgaagttttccggcgagtgttggaggattccgatgagctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  atgggtgctactgccaccggcgaagttttccggcgagtgttggaggattccgatgagctg 110

                                                                       
Query: 61  cacgtgctggctgttgatgacagccttgttgatcgtaaggtcattgagcgtttgctgaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cacgtgctggctgttgatgacagccttgttgatcgtaaggtcattgagcgtttgctgaag 170

                                                                       
Query: 121 atttcttcttgcaaagtgacggtggtggatagtggaacacgtgctcttcagtatttgggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atttcttcttgcaaagtgacggtggtggatagtggaacacgtgctcttcagtatttgggg 230

                                                                       
Query: 181 ttggatggagaagagaacagttctattggatttgatggggtgaaggttaatctcataatg 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 231 ttggatggagaagagaacagttctattggatttgatggtgtgaaggttaatctcataatg 290

                                                                 
Query: 241 acggattattccatgcctgggatgacagggtatgaattgctcaagaaaatcaag 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 acggattattccatgcctgggatgacagggtatgaattgctcaagaaaatcaag 344


>gnl|LJGI|TC73157 similar to UniRef100_A7PD82 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (52%)
          Length = 846

 Score =  151 bits (76), Expect = 3e-36
 Identities = 183/218 (83%), Gaps = 3/218 (1%)
 Strand = Plus / Plus

                                                                       
Query: 55  gagctgcacgtgctggctgttgatgacagccttgttgatcgtaaggtcattgagcgtttg 114
           |||||||| ||||| |||||||||||||||| ||| || || ||||||||||| || |||
Sbjct: 146 gagctgcatgtgcttgctgttgatgacagccatgtcgaccgcaaggtcattgaacggttg 205

                                                                       
Query: 115 ctgaagatttcttcttgcaaagtgacggtggtggatagtggaacacgtgctcttcagtat 174
           || |  || |||||||||||||| || || || |||||||||||  | ||| | ||||||
Sbjct: 206 ctcagaatctcttcttgcaaagttacagttgtagatagtggaaccagagctttgcagtat 265

                                                                       
Query: 175 ttggggttggatggagaagagaacagttctattggatttgatggggtgaaggttaatctc 234
            |||||||||||||    ||||| || || |||||  ||||| | |||||||||||||| 
Sbjct: 266 ctggggttggatgg---ggagaagagctcaattggtcttgatagtgtgaaggttaatctg 322

                                                 
Query: 235 ataatgacggattattccatgcctgggatgacagggta 272
           |||||||| |||||||||||||||||||||||||||||
Sbjct: 323 ataatgacagattattccatgcctgggatgacagggta 360


>gnl|LJGI|TC72429 similar to UniRef100_A7Q2K3 Cluster: Chromosome chr1 scaffold_46,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_46, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (52%)
          Length = 486

 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 252 catgcctgggatgacagggtatgaattgctcaagaaaatcaagg 295
           ||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 330 catgcctggaatgactggttatgaattgctcaagaaaatcaagg 373



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 76  gatgacagccttgttgatcgtaaggtcattgagcgtttgctgaagatttc 125
           |||||||||||  ||||||| ||||||||||| || ||||| ||||||||
Sbjct: 160 gatgacagcctcattgatcgaaaggtcattgaacgcttgctcaagatttc 209