Miyakogusa Predicted Gene
- Lj0g3v0139039.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0139039.2 tr|I1DU27|I1DU27_9GAMM Beta-glucosidase
OS=Rheinheimera nanhaiensis E407-8 GN=RNAN_0523 PE=4 SV=1,31.63,1.1,
,CUFF.8456.2
(426 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80993 454 e-127
gnl|LJGI|TC79969 weakly similar to UniRef100_A7P2N0 Cluster: Chr... 222 1e-57
gnl|LJGI|FS321456 homologue to UniRef100_A7NZ61 Cluster: Chromos... 101 3e-21
gnl|LJGI|TC67841 similar to UniRef100_A7PIM6 Cluster: Chromosome... 98 5e-20
gnl|LJGI|BP065104 56 2e-07
gnl|LJGI|TC76756 homologue to UniRef100_A7NSS1 Cluster: Chromoso... 56 2e-07
gnl|LJGI|TC58721 similar to UniRef100_Q2HTD6 Cluster: RNA-bindin... 56 2e-07
>gnl|LJGI|TC80993
Length = 1176
Score = 454 bits (229), Expect = e-127
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 194 caggccctgtctctgtcgtggatgaatgcgaagtgggtacccatggtcttcgttcgtcat 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggccctgtctctgtcgtggatgaatgcgaagtgggtacccatggtcttcgttcgtcat 60
Query: 254 tctttcaggtgaaaatcagaaagaagataatagattattcaggaaattgttcaatttatt 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctttcaggtgaaaatcagaaagaagataatagattattcaggaaattgttcaatttatt 120
Query: 314 gtcagcagatcatgtgtatcagaactcatatatgtactttactttgtcagttgattgttt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcagcagatcatgtgtatcagaactcatatatgtactttactttgtcagttgattgttt 180
Query: 374 caatgtcagctgagtacaaccgaagtacaagaagcagaagcacagatcatgtg 426
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 caatgtcagctgagtacaacagaagtacaagaagcagaagcacagatcatgtg 233
>gnl|LJGI|TC79969 weakly similar to UniRef100_A7P2N0 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 647
Score = 222 bits (112), Expect = 1e-57
Identities = 115/116 (99%)
Strand = Plus / Plus
Query: 311 attgtcagcagatcatgtgtatcagaactcatatatgtactttactttgtcagttgattg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attgtcagcagatcatgtgtatcagaactcatatatgtactttactttgtcagttgattg 61
Query: 371 tttcaatgtcagctgagtacaaccgaagtacaagaagcagaagcacagatcatgtg 426
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 62 tttcaatgtcagctgagtacaacagaagtacaagaagcagaagcacagatcatgtg 117
>gnl|LJGI|FS321456 homologue to UniRef100_A7NZ61 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 764
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 260 aggtgaaaatcagaaagaagataatagattattcaggaaattgttcaatttattgtcag 318
||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 164 aggtgaaaatcagaaggaagataatagattattcaggaaattgttcaatttgttgtcag 222
>gnl|LJGI|TC67841 similar to UniRef100_A7PIM6 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 2159
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 41 tttatttgactctctctccattttcactctttaatcttggcccttcatctgtgagac 97
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 13 tttatttgactctctctccattttcactcttaaatcctggcccttcatctgtgagac 69
>gnl|LJGI|BP065104
Length = 501
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 207 tgtcgtggatgaatgcgaagtgggtacc 234
||||||||||||||||||||||||||||
Sbjct: 247 tgtcgtggatgaatgcgaagtgggtacc 274
>gnl|LJGI|TC76756 homologue to UniRef100_A7NSS1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 792
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 207 tgtcgtggatgaatgcgaagtgggtacc 234
||||||||||||||||||||||||||||
Sbjct: 331 tgtcgtggatgaatgcgaagtgggtacc 358
>gnl|LJGI|TC58721 similar to UniRef100_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand; n=1;
Medicago truncatula|Rep: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand - Medicago
truncatula (Barrel medic), partial (13%)
Length = 797
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 155 ttgaagaagtatgggatgaaggagaggagtgt 186
||||||||||||||||||||||||| ||||||
Sbjct: 68 ttgaagaagtatgggatgaaggagaagagtgt 99