Miyakogusa Predicted Gene
- Lj0g3v0138739.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0138739.1 CUFF.8429.1
(1158 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74069 similar to UniRef100_A7NYC1 Cluster: Chromosome... 1467 0.0
gnl|LJGI|FS327884 similar to UniRef100_A7NYC1 Cluster: Chromosom... 936 0.0
gnl|LJGI|AV410512 similar to UniRef100_A7NYC1 Cluster: Chromosom... 807 0.0
gnl|LJGI|TC61754 similar to UniRef100_A7NYC1 Cluster: Chromosome... 262 4e-69
>gnl|LJGI|TC74069 similar to UniRef100_A7NYC1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 745
Score = 1467 bits (740), Expect = 0.0
Identities = 743/744 (99%)
Strand = Plus / Plus
Query: 334 gggggagcgttgcaggaggatgccaaggttgcattgtttaagcttgataatggcgaggtt 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggggagcgttgcaggaggatgccaaggttgcattgtttaagcttgataatggcgaggtt 61
Query: 394 cttgaatttcaagtgtttgttaaagcagacagggtttctccctttgacctcgcagctagt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cttgaatttcaagtgtttgttaaagcagacagggtttctccctttgacctcgcagctagt 121
Query: 454 tggagggcttatcaagagaacttccgtccttcagctgttcgttgggtgcctgatgtcagc 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggagggcttatcaagagaacttccgtccttcagctgttcgttgggtgcctgatgtcagc 181
Query: 514 ataaattcagcacctcagccaggtggcgagggtttggaacttgatcttgagcattatgtt 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ataaattcagcacctcagccaggtggcgagggtttggaacttgatcttgagcattatgtt 241
Query: 574 gtccctgctccctcaacctctgcaaattcagcccatgtatatgcagctaatatgacagag 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtccctgctccctcaacctctgcaaattcagcccatgtatatgcagctaatatgacagag 301
Query: 634 aatccaaggtcactaattagtcggtctggcagcagttcatattccaccaacgttaaggag 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatccaaggtcactaattagtcggtctggcagcagttcatattccaccaacgttaaggag 361
Query: 694 atggaagttattgtgccagatccatctaaggtgtttcaaagttctggaatggttgaatcc 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atggaagttattgtgccagatccatctaaggtgtttcaaagttctggaatggttgaatcc 421
Query: 754 aagtcagtgggaacattttcgcctttgcaaaagcaagatagtcagagaggactttttgtc 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagtcagtgggaacattttcgcctttgcaaaagcaagatagtcagagaggactttttgtc 481
Query: 814 gatagaggtgttgggtctcctagacttgtaaaatcttcttattcaaatgtgttttccaat 873
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gatagaggtgtggggtctcctagacttgtaaaatcttcttattcaaatgtgttttccaat 541
Query: 874 gatcttaatttgggcagtgataccaagagttcaatgccagctgctgctggagctgttgca 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gatcttaatttgggcagtgataccaagagttcaatgccagctgctgctggagctgttgca 601
Query: 934 gctgcagctgttgctgatcagatgctggggctaaaggaagatagacatttggcgattgtc 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gctgcagctgttgctgatcagatgctggggctaaaggaagatagacatttggcgattgtc 661
Query: 994 ctggtaggtctgccagctcgaggcaaaacttttactgcagctaaacttacaagatatctt 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctggtaggtctgccagctcgaggcaaaacttttactgcagctaaacttacaagatatctt 721
Query: 1054 cgttggttaggtcatgatacgaaa 1077
||||||||||||||||||||||||
Sbjct: 722 cgttggttaggtcatgatacgaaa 745
>gnl|LJGI|FS327884 similar to UniRef100_A7NYC1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 582
Score = 936 bits (472), Expect = 0.0
Identities = 472/472 (100%)
Strand = Plus / Plus
Query: 248 aaactttggatttcaaattcctgttgaagcctaagtacagcaatacgccttgttttattg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aaactttggatttcaaattcctgttgaagcctaagtacagcaatacgccttgttttattg 170
Query: 308 aggagggtccaaaccgcatactcatcgggggagcgttgcaggaggatgccaaggttgcat 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aggagggtccaaaccgcatactcatcgggggagcgttgcaggaggatgccaaggttgcat 230
Query: 368 tgtttaagcttgataatggcgaggttcttgaatttcaagtgtttgttaaagcagacaggg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tgtttaagcttgataatggcgaggttcttgaatttcaagtgtttgttaaagcagacaggg 290
Query: 428 tttctccctttgacctcgcagctagttggagggcttatcaagagaacttccgtccttcag 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tttctccctttgacctcgcagctagttggagggcttatcaagagaacttccgtccttcag 350
Query: 488 ctgttcgttgggtgcctgatgtcagcataaattcagcacctcagccaggtggcgagggtt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctgttcgttgggtgcctgatgtcagcataaattcagcacctcagccaggtggcgagggtt 410
Query: 548 tggaacttgatcttgagcattatgttgtccctgctccctcaacctctgcaaattcagccc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tggaacttgatcttgagcattatgttgtccctgctccctcaacctctgcaaattcagccc 470
Query: 608 atgtatatgcagctaatatgacagagaatccaaggtcactaattagtcggtctggcagca 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atgtatatgcagctaatatgacagagaatccaaggtcactaattagtcggtctggcagca 530
Query: 668 gttcatattccaccaacgttaaggagatggaagttattgtgccagatccatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gttcatattccaccaacgttaaggagatggaagttattgtgccagatccatc 582
Score = 210 bits (106), Expect = 1e-53
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 atgggatccggtgcttcgaaggaagctgatggtgattcagaaggaagcaaggagacagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atgggatccggtgcttcgaaggaagctgatggtgattcagaaggaagcaaggagacagtg 64
Query: 61 gaccaagcaggtggacaactctacgtctccctcaagatggagaatc 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gaccaagcaggtggacaactctacgtctccctcaagatggagaatc 110
>gnl|LJGI|AV410512 similar to UniRef100_A7NYC1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 429
Score = 807 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 1 atgggatccggtgcttcgaaggaagctgatggtgattcagaaggaagcaaggagacagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atgggatccggtgcttcgaaggaagctgatggtgattcagaaggaagcaaggagacagtg 78
Query: 61 gaccaagcaggtggacaactctacgtctccctcaagatggagaatcgtaagcttactggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gaccaagcaggtggacaactctacgtctccctcaagatggagaatcgtaagcttactggg 138
Query: 121 gagcttgttcctcacgtttatggctctgttcctcttgtgggctcttgggattcttcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gagcttgttcctcacgtttatggctctgttcctcttgtgggctcttgggattcttcaaaa 198
Query: 181 gctctttccatggaaagggaatctgtgtcaatgtgggagctgagcgttgttgttcctcct 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 199 gctctttccatggaaagggaatctgtgtcaatgtgggagctgagctttgttgttcctcct 258
Query: 241 aatcatgaaactttggatttcaaattcctgttgaagcctaagtacagcaatacgccttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aatcatgaaactttggatttcaaattcctgttgaagcctaagtacagcaatacgccttgt 318
Query: 301 tttattgaggagggtccaaaccgcatactcatcgggggagcgttgcaggaggatgccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tttattgaggagggtccaaaccgcatactcatcgggggagcgttgcaggaggatgccaag 378
Query: 361 gttgcattgtttaagcttgataatggcgaggttcttgaatttcaagtgttt 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gttgcattgtttaagcttgataatggcgaggttcttgaatttcaagtgttt 429
>gnl|LJGI|TC61754 similar to UniRef100_A7NYC1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 760
Score = 262 bits (132), Expect = 4e-69
Identities = 368/450 (81%), Gaps = 15/450 (3%)
Strand = Plus / Plus
Query: 166 tgggattcttcaaaagctctttccatggaaagggaatctgtgtcaatgtgggagctgagc 225
|||||| |||| ||||||||||| |||| ||||||||| | |||||||||||| |||||
Sbjct: 281 tgggatccttccaaagctctttctatggtaagggaatcggcgtcaatgtgggaattgagc 340
Query: 226 gttgttgttcctcctaatcatgaaactttggatttcaaattcctgttgaagcctaagtac 285
|||||||||| || ||||||||| |||| |||||||||||||| || ||||| ||| |
Sbjct: 341 tttgttgttccaccaaatcatgaagctttagatttcaaattcctcttaaagcccaaggat 400
Query: 286 agcaatacgccttgttttattgaggagggtccaaaccgcatactcatcgggggagcgttg 345
| |||||| |||||||| ||||||||||||||| ||| ||||||| |||||||| |||
Sbjct: 401 atcaatacaccttgtttggttgaggagggtccaagtcgcttactcattgggggagcattg 460
Query: 346 caggaggatgccaaggttgcattgtttaagcttgataatggcgaggttcttgaatttcaa 405
||||| | |||| | |||| ||||||||| ||||||||| ||||| |||| | ||||
Sbjct: 461 caggatggagccaggcttgctttgtttaagtttgataatgatcaggttgttgagtatcaa 520
Query: 406 gtgtttgttaaagcagacagggtttctccctttgacctcgcagctagttggagggcttat 465
||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 521 gtgtttgttgaagcgagcagggtttctccctttgaccttgcagctagttggagggcgtat 580
Query: 466 caagagaacttccgtccttcagctgttcgttgggtgcctgatgtcagcataaattcagca 525
|| || | |||| | ||| |||| || || | |||||||| ||||||||||||| |
Sbjct: 581 caggaccatttccatatttcgcctgtacgcgggatacctgatgttagcataaattcagaa 640
Query: 526 cctcagccaggtggcga---------------gggtttggaacttgatcttgagcattat 570
|||||| || ||||||| | ||||||||||||||||||||||||||
Sbjct: 641 cctcagacaagtggcgagaatgtctcttgtgtgagtttggaacttgatcttgagcattat 700
Query: 571 gttgtccctgctccctcaacctctgcaaat 600
|||||||| ||||||||||| |||||||||
Sbjct: 701 gttgtcccagctccctcaacttctgcaaat 730