Miyakogusa Predicted Gene
- Lj0g3v0138719.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0138719.1 Non Chatacterized Hit- tr|I1LMW8|I1LMW8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31139
PE,82.17,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; AMINO ACID
TRANSPORTER,NULL; Aa_trans,Amino acid transporter, tr,CUFF.8427.1
(444 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62990 weakly similar to UniRef100_A7Q3S1 Cluster: Chr... 749 0.0
gnl|LJGI|TC73453 similar to UniRef100_A7Q3S1 Cluster: Chromosome... 86 2e-16
>gnl|LJGI|TC62990 weakly similar to UniRef100_A7Q3S1 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (90%)
Length = 1836
Score = 749 bits (378), Expect = 0.0
Identities = 420/434 (96%)
Strand = Plus / Plus
Query: 11 ttttcccctttttcgttatcctcctcaatttcatccccgccggcatgtctccgtcggccg 70
|||| ||||||||||||||||||| ||||| ||||||||||| |||||| ||||||||||
Sbjct: 3 ttttaccctttttcgttatcctccccaattccatccccgccgacatgtcaccgtcggccg 62
Query: 71 gagtccacgtccccctcctaccgggatccaaaccggcggctccgccggcgtccgtctccg 130
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 63 gagtccacgtccccctcctaccgggatccaaaccagcggctccgccggcgtccgtctccg 122
Query: 131 gcgccgttttcaatgtcgccaacagcatcgtcggcgccggaatcatgtcgatcccggcgc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgccgttttcaatgtcgccaacagcatcgtcggcgccggaatcatgtcgatcccggcgc 182
Query: 191 tcctgaaggttctcggtgtgatccccgctttcgccatgattctggtcgtcgccgtgctgg 250
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 183 tcctgaaggttctcggcgtgatccccgctttcgccatgattctgatcgtcgccgtgctgg 242
Query: 251 cggaaatctccgtcgactatctcatgcggttcacgcattccggcgaaaccaagacctacg 310
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cggaaatctccgtcgactacctcatgcggttcacgcattccggcgaaaccaagacctacg 302
Query: 311 ccggcgtcatgagggaggcgtttgggccgcccggagctttaaccgcgcaagtttgtgtga 370
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 303 ccggcgtcatgagggaggcgtttgggccgcccggagctttagccgcgcaagtttgtgtta 362
Query: 371 taatcaacaacctggggggtctaattctctacctaatcatcatcggggatgtgctatctg 430
|||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 363 taatcaccaaccttgggggtttaattctctacctaatcatcatcggggatgtgctatctg 422
Query: 431 ggaatcatagcgga 444
||||||||||||||
Sbjct: 423 ggaatcatagcgga 436
>gnl|LJGI|TC73453 similar to UniRef100_A7Q3S1 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 818
Score = 85.7 bits (43), Expect = 2e-16
Identities = 172/215 (80%)
Strand = Plus / Plus
Query: 124 gtctccggcgccgttttcaatgtcgccaacagcatcgtcggcgccggaatcatgtcgatc 183
|||||||||||||| ||||||||| | | |||||| | ||||||||||||||||| ||
Sbjct: 309 gtctccggcgccgtgttcaatgtctctaccagcataattggcgccggaatcatgtctctc 368
Query: 184 ccggcgctcctgaaggttctcggtgtgatccccgctttcgccatgattctggtcgtcgcc 243
|||||| |||||||||||| || ||| | || || || | |||||||||| ||||
Sbjct: 369 ccggcgaccctgaaggttctgggcgtggttccggcgtttgtgctgattctggttatcgct 428
Query: 244 gtgctggcggaaatctccgtcgactatctcatgcggttcacgcattccggcgaaaccaag 303
| || || ||| | || || |||| |||||| ||||||||||||||||||| || |
Sbjct: 429 tttctagctgaagtgtcagtggacttcctcatgaggttcacgcattccggcgagacgaca 488
Query: 304 acctacgccggcgtcatgagggaggcgtttgggcc 338
|| ||||||||||| ||||| || |||||||||||
Sbjct: 489 acgtacgccggcgttatgagagaagcgtttgggcc 523