Miyakogusa Predicted Gene

Lj0g3v0138369.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0138369.1 Non Chatacterized Hit- tr|F0WVG9|F0WVG9_9STRA
Putative uncharacterized protein AlNc14C296G10304
OS=A,28.48,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; ZINC FINGER HIT
DOMAIN CONTAINING PROTEIN 2 (PROTEIN FON)-RELATE,CUFF.8414.1
         (1041 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72140 similar to UniRef100_Q337A7 Cluster: HIT zinc f...   676   0.0  
gnl|LJGI|BP072163 similar to UniRef100_A7QJ87 Cluster: Chromosom...   367   e-101
gnl|LJGI|AV767560                                                     200   1e-50

>gnl|LJGI|TC72140 similar to UniRef100_Q337A7 Cluster: HIT zinc finger family protein,
            expressed; n=1; Oryza sativa Japonica Group|Rep: HIT zinc
            finger family protein, expressed - Oryza sativa subsp.
            japonica (Rice), partial (11%)
          Length = 525

 Score =  676 bits (341), Expect = 0.0
 Identities = 341/341 (100%)
 Strand = Plus / Plus

                                                                        
Query: 701  ttgatgatgtgattagtcttcttgcattgggaagttctgctctggtgtgtgccctttgcg 760
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttgatgatgtgattagtcttcttgcattgggaagttctgctctggtgtgtgccctttgcg 60

                                                                        
Query: 761  atatgcgtcggttggttcaagaaggcggaaaggagaacaaatcagaaagaaggccaagaa 820
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atatgcgtcggttggttcaagaaggcggaaaggagaacaaatcagaaagaaggccaagaa 120

                                                                        
Query: 821  ggttgaggaaggatgagattagaagtgctattaagatggcagagaggaagatatatttca 880
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ggttgaggaaggatgagattagaagtgctattaagatggcagagaggaagatatatttca 180

                                                                        
Query: 881  ttatgtgttgggttcatgagcagccagaggaagcttggtcttctttggcagccattgtgg 940
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ttatgtgttgggttcatgagcagccagaggaagcttggtcttctttggcagccattgtgg 240

                                                                        
Query: 941  gagcagaaaaggtatcagctgtggaatttcatgggagtaataaggctgaaagattgttga 1000
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gagcagaaaaggtatcagctgtggaatttcatgggagtaataaggctgaaagattgttga 300

                                                     
Query: 1001 acaataaagcagaaaccaaaagcagatgtttaatagaggag 1041
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  acaataaagcagaaaccaaaagcagatgtttaatagaggag 341


>gnl|LJGI|BP072163 similar to UniRef100_A7QJ87 Cluster: Chromosome chr2 scaffold_105,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_105, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (9%)
          Length = 396

 Score =  367 bits (185), Expect = e-101
 Identities = 222/229 (96%), Gaps = 4/229 (1%)
 Strand = Plus / Minus

                                                                        
Query: 817  agaaggttgaggaaggatgagattagaagtgctattaagatggcagagaggaagatatat 876
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 396  agaaggttgaggaaggatgagattagaagtgctattaagatggcagagagaaagatatat 337

                                                                        
Query: 877  ttcattatgtgttgggttc-atg-agcagcc-agaggaagcttggtcttctttggcagcc 933
            ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 336  ttcattatgtgttgggttcgatggagcagcccagaggaagcttggtcttctttggcagcc 277

                                                                        
Query: 934  attgtgggagcagaaaaggtatcagctgtggaatttcatgggagtaataaggctgaaaga 993
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 276  attgtgggagcagaaaaggtatcagctgtggaatttcatgggagtgataaggctgaaaga 217

                                                             
Query: 994  ttgttgaacaataaagcagaaaccaaaagca-gatgtttaatagaggag 1041
            |||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 216  ttgttgaacaataaagcagaaaccaaaagcacaatgtttaatagaggag 168


>gnl|LJGI|AV767560 
          Length = 286

 Score =  200 bits (101), Expect = 1e-50
 Identities = 153/169 (90%), Gaps = 1/169 (0%)
 Strand = Plus / Minus

                                                                        
Query: 873  atatttcattatgtgttgggttcatgagcagccagaggaa-gcttggtcttctttggcag 931
            ||||||||||||||||||||||||||| |||||| | ||| ||||||| || ||||||||
Sbjct: 286  atatttcattatgtgttgggttcatgaacagccacaagaaagcttggttttttttggcag 227

                                                                        
Query: 932  ccattgtgggagcagaaaaggtatcagctgtggaatttcatgggagtaataaggctgaaa 991
            || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226  cccttgtgggagcaaaaaaggtatcagctgtggaatttcatgggagtaataaggctgaaa 167

                                                             
Query: 992  gattgttgaacaataaagcagaaaccaaaagcagatgtttaatagagga 1040
             ||||||   |||| ||||||||||| |||||| |||||||||| ||||
Sbjct: 166  aattgtttctcaattaagcagaaacccaaagcaaatgtttaataaagga 118