Miyakogusa Predicted Gene
- Lj0g3v0136749.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0136749.1 Non Chatacterized Hit- tr|C5Y9U4|C5Y9U4_SORBI
Putative uncharacterized protein Sb06g018950
OS=Sorghu,43.02,6e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; ArsA_ATPase,Anion-transporting ATPase-lik,CUFF.8364.1
(714 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67424 similar to UniRef100_A7PI19 Cluster: Chromosome... 1273 0.0
gnl|LJGI|TC61506 similar to UniRef100_A7PI19 Cluster: Chromosome... 72 5e-12
>gnl|LJGI|TC67424 similar to UniRef100_A7PI19 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 767
Score = 1273 bits (642), Expect = 0.0
Identities = 648/650 (99%)
Strand = Plus / Plus
Query: 1 atggcttcatgttactctgctacttcatcttctcttcgcacaacgaactccatggccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggcttcatgttactctgctacttcatcttctcttcgcacaacgaactccatggccatg 177
Query: 61 gccatcaagggtgtcctctccttcgctccctcttcacctcctctccttcatcttccccag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 178 gccatcaagggtgtcctctccttcgctccctcctcacctcctctccttcatcttccccag 237
Query: 121 aacttcacctttgtttcattccgtgcttccccaaaaccccccaccaagcctcttcaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aacttcacctttgtttcattccgtgcttccccaaaaccccccaccaagcctcttcaagtg 297
Query: 181 agattggtggctgctcctgcagaagctgtagcagggtttgatgacatggtttctgggact 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agatcggtggctgctcctgcagaagctgtagcagggtttgatgacatggtttctgggact 357
Query: 241 gagaggaagtattacttgctaggtgggaaaggtggggtagggaagaccagttgtgcttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gagaggaagtattacttgctaggtgggaaaggtggggtagggaagaccagttgtgcttct 417
Query: 301 tcgcttgctgttaaatttgccaacaatggtcaccccactcttgtggtttccactgatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcgcttgctgttaaatttgccaacaatggtcaccccactcttgtggtttccactgatcca 477
Query: 361 gcacattctttgagcgattcttttgcacaggatttgacaggcgggctattggttccagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gcacattctttgagcgattcttttgcacaggatttgacaggcgggctattggttccagtg 537
Query: 421 gaaggacctgattctccgctttttgctcttgaaataaaccccgagaaggctagggaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaaggacctgattctccgctttttgctcttgaaataaaccccgagaaggctagggaagag 597
Query: 481 tttcgaaatgcagccaaaacaaatggtggaagtggtggagtcaaagacttcatggatgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tttcgaaatgcagccaaaacaaatggtggaagtggtggagtcaaagacttcatggatgga 657
Query: 541 atgggtcttggaatgattgtagaccagctgggagagctaaaacttggagagttactggat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atgggtcttggaatgattgtagaccagctgggagagctaaaacttggagagttactggat 717
Query: 601 acacctcctcctggactggatgaagctattgcaatttccaaggtcattca 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 acacctcctcctggactggatgaagctattgcaatttccaaggtcattca 767
>gnl|LJGI|TC61506 similar to UniRef100_A7PI19 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1564
Score = 71.9 bits (36), Expect = 5e-12
Identities = 129/160 (80%)
Strand = Plus / Plus
Query: 242 agaggaagtattacttgctaggtgggaaaggtggggtagggaagaccagttgtgcttctt 301
||||||| ||||| ||||| ||||||||||| ||||| ||||| || || |||||| |||
Sbjct: 223 agaggaaatattatttgcttggtgggaaaggaggggttgggaaaacaagctgtgctgctt 282
Query: 302 cgcttgctgttaaatttgccaacaatggtcaccccactcttgtggtttccactgatccag 361
| || ||||| |||||||| || | || || |||||| | ||||| || ||||| || |
Sbjct: 283 ctctagctgtcaaatttgcaaatgaaggacatcccactatggtggtatcaactgaccctg 342
Query: 362 cacattctttgagcgattcttttgcacaggatttgacagg 401
| || || || || || |||||||| ||||||||||||||
Sbjct: 343 ctcactccttaagtgactcttttgcccaggatttgacagg 382
Score = 52.0 bits (26), Expect = 5e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 640 aaggtcattcaatttcttgaatcaccagaatata 673
|||||||| ||||||||||| |||||||||||||
Sbjct: 618 aaggtcatgcaatttcttgagtcaccagaatata 651