Miyakogusa Predicted Gene
- Lj0g3v0135679.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0135679.1 Non Chatacterized Hit- tr|I1KC97|I1KC97_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57031
PE,86.4,0,ZF_RING_2,Zinc finger, RING-type; vWA-like,NULL;
RING/U-box,NULL; seg,NULL; COPINE,NULL; Copine,Copi,CUFF.8315.1
(1332 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62168 similar to UniRef100_A7PCN7 Cluster: Chromosome... 1647 0.0
gnl|LJGI|GO026494 similar to UniRef100_A7PM08 Cluster: Chromosom... 1059 0.0
gnl|LJGI|TC69360 similar to UniRef100_Q08ET6 Cluster: RING-finge... 878 0.0
gnl|LJGI|DC598835 similar to UniRef100_A7PM08 Cluster: Chromosom... 167 2e-40
gnl|LJGI|TC62262 similar to UniRef100_Q08ET6 Cluster: RING-finge... 105 7e-22
gnl|LJGI|TC82550 similar to UniRef100_Q6YYC5 Cluster: Copine I-l... 84 3e-15
gnl|LJGI|TC63059 similar to UniRef100_A7PM08 Cluster: Chromosome... 58 1e-07
gnl|LJGI|FS319939 similar to UniRef100_Q08ET6 Cluster: RING-fing... 54 2e-06
>gnl|LJGI|TC62168 similar to UniRef100_A7PCN7 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 907
Score = 1647 bits (831), Expect = 0.0
Identities = 831/831 (100%)
Strand = Plus / Plus
Query: 1 atgggtggatcaagttcaaaaagggtgaattcaaggcaacgttcctcttcaaggtccggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atgggtggatcaagttcaaaaagggtgaattcaaggcaacgttcctcttcaaggtccggt 136
Query: 61 tcaactccctggtatcctcaatatcaatcaccttacttgccacaaaaccaagatcatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tcaactccctggtatcctcaatatcaatcaccttacttgccacaaaaccaagatcatggg 196
Query: 121 gctcctcaggggcatgaagggcatcatcatccatctcaaagctatggtagtgctggtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gctcctcaggggcatgaagggcatcatcatccatctcaaagctatggtagtgctggtggt 256
Query: 181 tatgctcccgagcaaagaaagagatcagacaagaagtatacaaggatagatgataactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatgctcccgagcaaagaaagagatcagacaagaagtatacaaggatagatgataactat 316
Query: 241 aaaagcttggaccaggtaactgaggctcttgcaaatgctggtttggagtcttccaatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaaagcttggaccaggtaactgaggctcttgcaaatgctggtttggagtcttccaatctc 376
Query: 301 attgttggtattgattttacaaagagcaatgagtggacaggtgcaaggtcatttcaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 attgttggtattgattttacaaagagcaatgagtggacaggtgcaaggtcatttcaaaga 436
Query: 361 agatgcctacatcacatcgggcatgaacagaatccatatgaacaagctatatctatcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agatgcctacatcacatcgggcatgaacagaatccatatgaacaagctatatctatcatt 496
Query: 421 gggaaaacattatcctcctttgatgaagataacttaattccctgttatggatttggagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gggaaaacattatcctcctttgatgaagataacttaattccctgttatggatttggagat 556
Query: 481 gcatcaacacatgaccaggaagtttttagtttcaatcccgatgagagattttgtcaagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gcatcaacacatgaccaggaagtttttagtttcaatcccgatgagagattttgtcaagga 616
Query: 541 tttgaagaagtgttgacacggtacagggaattggttccacaattaaagcttgcaggacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttgaagaagtgttgacacggtacagggaattggttccacaattaaagcttgcaggacca 676
Query: 601 acatcatttggtccaatcatcgagatggcaatcaccatagttgagcaaagtggaggccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acatcatttggtccaatcatcgagatggcaatcaccatagttgagcaaagtggaggccaa 736
Query: 661 taccatgtcttggtgatcatagcagatggccaggtgacaagaagtgttgacaccgagcgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 taccatgtcttggtgatcatagcagatggccaggtgacaagaagtgttgacaccgagcgt 796
Query: 721 gggcagttgagttctcaagaaaagaaaactgtagaagctattgtgaaagctagtgaatat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gggcagttgagttctcaagaaaagaaaactgtagaagctattgtgaaagctagtgaatat 856
Query: 781 cccctgtcaatcatattagttggagttggggatgggccatgggatatgatg 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 cccctgtcaatcatattagttggagttggggatgggccatgggatatgatg 907
>gnl|LJGI|GO026494 similar to UniRef100_A7PM08 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 692
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atgggtggatcaagttcaaaaagggtgaattcaaggcaacgttcctcttcaaggtccggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgggtggatcaagttcaaaaagggtgaattcaaggcaacgttcctcttcaaggtccggt 218
Query: 61 tcaactccctggtatcctcaatatcaatcaccttacttgccacaaaaccaagatcatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcaactccctggtatcctcaatatcaatcaccttacttgccacaaaaccaagatcatggg 278
Query: 121 gctcctcaggggcatgaagggcatcatcatccatctcaaagctatggtagtgctggtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gctcctcaggggcatgaagggcatcatcatccatctcaaagctatggtagtgctggtggt 338
Query: 181 tatgctcccgagcaaagaaagagatcagacaagaagtatacaaggatagatgataactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tatgctcccgagcaaagaaagagatcagacaagaagtatacaaggatagatgataactat 398
Query: 241 aaaagcttggaccaggtaactgaggctcttgcaaatgctggtttggagtcttccaatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aaaagcttggaccaggtaactgaggctcttgcaaatgctggtttggagtcttccaatctc 458
Query: 301 attgttggtattgattttacaaagagcaatgagtggacaggtgcaaggtcatttcaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 attgttggtattgattttacaaagagcaatgagtggacaggtgcaaggtcatttcaaaga 518
Query: 361 agatgcctacatcacatcgggcatgaacagaatccatatgaacaagctatatctatcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 agatgcctacatcacatcgggcatgaacagaatccatatgaacaagctatatctatcatt 578
Query: 421 gggaaaacattatcctcctttgatgaagataacttaattccctgttatggatttggagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gggaaaacattatcctcctttgatgaagataacttaattccctgttatggatttggagat 638
Query: 481 gcatcaacacatgaccaggaagtttttagtttcaatcccgatgagagattttgt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gcatcaacacatgaccaggaagtttttagtttcaatcccgatgagagattttgt 692
>gnl|LJGI|TC69360 similar to UniRef100_Q08ET6 Cluster: RING-finger protein; n=1;
Capsicum annuum|Rep: RING-finger protein - Capsicum
annuum (Bell pepper), partial (24%)
Length = 698
Score = 878 bits (443), Expect = 0.0
Identities = 445/446 (99%)
Strand = Plus / Plus
Query: 887 atttcacagaaataatgtcaaagaacatggatcggtccagaaaggaaactgagtttgcac 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttcacagaaataatgtcaaagaacatggatcggtccagaaaggaaactgagtttgcac 60
Query: 947 ttgctgcattgatggaaataccctcccaatataaggcaacactagaacttaatatattgg 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgctgcattgatggaaataccctcccaatataaggcaacactagaacttaatatattgg 120
Query: 1007 gtgcacgtagagggaaagctatcgacaggattcctctaccaccacctctatatggtgcca 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgcacgtagagggaaagctatcgacaggattcctctaccaccacctctatatggtgcca 180
Query: 1067 ccgcatcttacaactccccaaaaacttcacgtcaaagcagttttcgtcccagtgcaccat 1126
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgcatcttacaactccccnaaaacttcacgtcaaagcagttttcgtcccagtgcaccat 240
Query: 1127 ctcacaggcatgacattggcacgaatcctcctgcaagttttgcaagttctgcttctgata 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcacaggcatgacattggcacgaatcctcctgcaagttttgcaagttctgcttctgata 300
Query: 1187 atcaggtttgtcccatttgcctcaccgatcctaagaatatggcctttggttgtgggcatc 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcaggtttgtcccatttgcctcaccgatcctaagaatatggcctttggttgtgggcatc 360
Query: 1247 agacatgctgtgagtgcggacaagatcttgagttatgccccatttgcaggagtaccattg 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agacatgctgtgagtgcggacaagatcttgagttatgccccatttgcaggagtaccattg 420
Query: 1307 atactagaataaaactttattagatg 1332
||||||||||||||||||||||||||
Sbjct: 421 atactagaataaaactttattagatg 446
>gnl|LJGI|DC598835 similar to UniRef100_A7PM08 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 563
Score = 167 bits (84), Expect = 2e-40
Identities = 329/408 (80%), Gaps = 2/408 (0%)
Strand = Plus / Plus
Query: 508 agtttcaatcccgatgagagattttgtcaaggatttgaagaagtgttgacacggtacagg 567
|||||| |||| ||||| |||||||| | ||||||||||||||| ||| |||||||||
Sbjct: 20 agtttctatccagatgaaagattttgcaatggatttgaagaagtgctgagtcggtacagg 79
Query: 568 gaattggttccaca-attaaagcttgcaggaccaacatcatttggtccaatcatcgagat 626
||| | |||| | ||| | |||||||| || || ||||||| |||||||| || ||
Sbjct: 80 gaaattattcctaatattcga-cttgcaggccctacttcatttgcaccaatcattgaaat 138
Query: 627 ggcaatcaccatagttgagcaaagtggaggccaataccatgtcttggtgatcatagcaga 686
||| || || || |||||||| |||||||||||||| ||||| |||||||| | |||||
Sbjct: 139 ggccatgacaattgttgagcagagtggaggccaatatcatgttttggtgatagttgcaga 198
Query: 687 tggccaggtgacaagaagtgttgacaccgagcgtgggcagttgagttctcaagaaaagaa 746
||||||||| ||||||||| ||||||| || ||||| | | ||| | || || | ||
Sbjct: 199 tggccaggtaacaagaagtattgacactgaaagtgggaggctaagtccacaggagcaaaa 258
Query: 747 aactgtagaagctattgtgaaagctagtgaatatcccctgtcaatcatattagttggagt 806
||||| || |||||||| | || ||| ||| ||| || ||||||||||| ||||| ||
Sbjct: 259 gactgttgatgctattgttgaggccagtaaatttcctctttcaatcatattggttggtgt 318
Query: 807 tggggatgggccatgggatatgatgaaagaatttgacgataacatccctgcccgagcatt 866
||| ||||| || ||||| ||||||| ||| ||||| ||||| ||||| | || || ||
Sbjct: 319 tggagatggaccttgggacatgatgagagagtttgatgataatatcccctctcgggcctt 378
Query: 867 tgataatttccagtttgtgaatttcacagaaataatgtcaaagaacat 914
|||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 379 tgataatttccagtttgtaaatttcacggaaattatgtcaaagaacat 426
>gnl|LJGI|TC62262 similar to UniRef100_Q08ET6 Cluster: RING-finger protein; n=1;
Capsicum annuum|Rep: RING-finger protein - Capsicum
annuum (Bell pepper), partial (21%)
Length = 808
Score = 105 bits (53), Expect = 7e-22
Identities = 194/241 (80%)
Strand = Plus / Plus
Query: 254 aggtaactgaggctcttgcaaatgctggtttggagtcttccaatctcattgttggtattg 313
|||| ||||||||||||||| ||| || | |||||||||||||| ||| |||||||||
Sbjct: 561 aggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttggtattg 620
Query: 314 attttacaaagagcaatgagtggacaggtgcaaggtcatttcaaagaagatgcctacatc 373
||| || |||||||||||||||||||| |||||| | ||| | || | ||||
Sbjct: 621 attgcactaagagcaatgagtggacaggaaagcattcatttaacagacaaagcttgcatc 680
Query: 374 acatcgggcatgaacagaatccatatgaacaagctatatctatcattgggaaaacattat 433
|||| ||| ||| | |||||||||||||||||| ||||| || ||||||||||| |
Sbjct: 681 acattgggaatgttccgaatccatatgaacaagcaatatccattattgggaaaaccatgg 740
Query: 434 cctcctttgatgaagataacttaattccctgttatggatttggagatgcatcaacacatg 493
| | |||||||| |||||||| ||||| |||| ||||||||| ||||||||||| ||||
Sbjct: 741 ctgcatttgatgaggataacttgattccttgttttggatttggcgatgcatcaacgcatg 800
Query: 494 a 494
|
Sbjct: 801 a 801
>gnl|LJGI|TC82550 similar to UniRef100_Q6YYC5 Cluster: Copine I-like protein; n=1;
Oryza sativa Japonica Group|Rep: Copine I-like protein -
Oryza sativa subsp. japonica (Rice), partial (58%)
Length = 1091
Score = 83.8 bits (42), Expect = 3e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 636 catagttgagcaaagtggaggccaataccatgtcttggtgatcatagcagatggccaggt 695
|||||||||| ||||| | ||||||| |||||| ||||| |||| ||||||||||||||
Sbjct: 142 catagttgagaaaagtcgtggccaattccatgtgttggttgtcattgcagatggccaggt 201
Query: 696 gacaagaagtgttgacac 713
|||||||||||||||||
Sbjct: 202 tacaagaagtgttgacac 219
>gnl|LJGI|TC63059 similar to UniRef100_A7PM08 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 729
Score = 58.0 bits (29), Expect = 1e-07
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 1237 tgtgggcatcagacatgctgtgagtgcggacaagatcttgagttatgccccatttgcagg 1296
||||||||||||||||| |||||||| || ||||||||| ||| || ||||| || |||
Sbjct: 347 tgtgggcatcagacatgttgtgagtgtgggcaagatcttcagtcgtgtcccatctgtagg 406
Query: 1297 agtaccattgatactagaataaaacttta 1325
|| ||||| | || |||||||| |||||
Sbjct: 407 agccccattaacaccagaataaagcttta 435
>gnl|LJGI|FS319939 similar to UniRef100_Q08ET6 Cluster: RING-finger protein; n=1;
Capsicum annuum|Rep: RING-finger protein - Capsicum
annuum (Bell pepper), partial (8%)
Length = 712
Score = 54.0 bits (27), Expect = 2e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 254 aggtaactgaggctcttgcaaatgctggtttggagtcttccaatctcattgttggtattg 313
|||| ||||||||||||||| ||| || | |||||||||||||| ||| |||||||||
Sbjct: 640 aggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttggtattg 699
Query: 314 att 316
|||
Sbjct: 700 att 702