Miyakogusa Predicted Gene
- Lj0g3v0134409.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0134409.1 NODE_31136_length_1917_cov_51.770996.path1.1
(1041 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome... 1405 0.0
gnl|LJGI|TC79360 weakly similar to UniRef100_A7PC79 Cluster: Chr... 476 e-133
gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome... 131 1e-29
gnl|LJGI|TC75292 similar to UniRef100_Q2HTN6 Cluster: Helix-loop... 70 3e-11
>gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 770
Score = 1405 bits (709), Expect = 0.0
Identities = 712/713 (99%)
Strand = Plus / Plus
Query: 1 atggccttagaggcagtggttttcccacaagatccattcacatacaattacaaagattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 atggccttagaggcagtggttttcccacaagatccattcacatacaattacaaagattac 117
Query: 61 ttgtactctttagttggaggaaaccctccaagtgaaggatcaaactggaaccgccacgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ttgtactctttagttggaggaaaccctccaagtgaaggatcaaactggaaccgccacgaa 177
Query: 121 tacggttcctttgcagaagaagagaaagcacttctgggaatcatcaacagtaacatagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tacggttcctttgcagaagaagagaaagcacttctgggaatcatcaacagtaacatagag 237
Query: 181 cacaatctccatgcaaattgggactcttctacttctccttcagtggttcaaaatgtcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cacaatctccatgcaaattgggactcttctacttctccttcagtggttcaaaatgtcaaa 297
Query: 241 gatcaatgcgattcacactcatccccagaggcatgcatcatcgattattcctcgcccgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gatcaatgcgattcacactcatccccagaggcatgcatcatcgattattcctcgcccgga 357
Query: 301 actgacaatcttcctccttccatcaccactgcggccaccgtcaccggtcggcgtaaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 actgacaatcttcctccttccatcaccactgcggccaccgtcaccggtcggcgtaaaagg 417
Query: 361 cgctgtaccaagagtgcgaagaatcaggaggacatcgaaaaccagaggatgactcacatt 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cgccgtaccaagagtgcgaagaatcaggaggacatcgaaaaccagaggatgactcacatt 477
Query: 421 gcagttgagcgcaatcgaaggaaacagatgaatgagtacctagctgtgctcagatccttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gcagttgagcgcaatcgaaggaaacagatgaatgagtacctagctgtgctcagatccttg 537
Query: 481 atgcctccttcttatgtacaaaggggtgatcaagcttctatcattggaggtgccattaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atgcctccttcttatgtacaaaggggtgatcaagcttctatcattggaggtgccattaac 597
Query: 541 tttgtgaaggagctagagcagcttctacaatgcatgaaggggcgaaacatcaaaacaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tttgtgaaggagctagagcagcttctacaatgcatgaaggggcgaaacatcaaaacaaag 657
Query: 601 gaacaacaacaacaatggcatgaagatggttcatcttcatcgccctttgctgagttcttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaacaacaacaacaatggcatgaagatggttcatcttcatcgccctttgctgagttcttc 717
Query: 661 atgttccctcagtactctacacgtgcaacatcggagggcagcacgagctatcc 713
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atgttccctcagtactctacacgtgcaacatcggagggcagcacgagctatcc 770
>gnl|LJGI|TC79360 weakly similar to UniRef100_A7PC79 Cluster: Chromosome chr2
scaffold_11, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_11, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 637
Score = 476 bits (240), Expect = e-133
Identities = 264/271 (97%), Gaps = 2/271 (0%)
Strand = Plus / Plus
Query: 773 acatagaggtgaccttggtggatggtcatgccaatattaagatactgtcaaagaagcaac 832
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 acatagaggtgaccttggtggatggtcatgccaatattaagatactgtccaagaagcaac 60
Query: 833 ccgggcagcttgtgaagatggttcttgggatgcaaagtcttggtttcatcattctccatc 892
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgggccgcttgtgaagatggttcttgggatgcaaagtcttggtttcatcattctccatc 120
Query: 893 ttaatgttactactgtggaagatatggtacttgcttctgttagtgtgaaggtagaggaag 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaatgttactactgtggaagatatggtacttgcttctgttagtgtgaaggtagaggaag 180
Query: 953 gatgtgagctgaacac--agtggatgaaattgcagctgctatgaatcaattatcaagcac 1010
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgtgagctgaaccccacgtggatgaaattgcagctgctatgaatcaattatcaagcac 240
Query: 1011 agttcaagaagaagctgctagtttctgctga 1041
||||| |||||||||||||||||||||||||
Sbjct: 241 agttccagaagaagctgctagtttctgctga 271
>gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 539
Score = 131 bits (66), Expect = 1e-29
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 394 atcgaaaaccagaggatgactcacattgcagttgagcgcaatcgaaggaaacagatgaat 453
||||| || ||||||||||| ||||| || ||||| || || || | |||||||||||
Sbjct: 382 atcgagaatcagaggatgacccacatcgcggttgaacgaaaccgccgcaaacagatgaac 441
Query: 454 gagtacctagctgtgctcagatccttgatgcctccttcttatgtacaaaggggtgatcaa 513
|||||||| ||| ||| ||||| ||||||||| |||||||||| ||||||||||| |||
Sbjct: 442 gagtacctttctgcgctaagatctttgatgccttcttcttatgttcaaaggggtgaccaa 501
Query: 514 gcttctatcattggaggtgccattaactttgtgaagga 551
|| ||||| ||||||||||| |||||||||||||||||
Sbjct: 502 gcgtctattattggaggtgctattaactttgtgaagga 539
>gnl|LJGI|TC75292 similar to UniRef100_Q2HTN6 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (24%)
Length = 675
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 499 caaaggggtgatcaagcttctatcattggaggtgccattaactttgt 545
||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 625 caaaggggtgatcaagcttctataattggaggggctattaactttgt 671