Miyakogusa Predicted Gene

Lj0g3v0134319.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0134319.1 CUFF.8216.1
         (450 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63133 similar to UniRef100_A7Q8X9 Cluster: Chromosome...   174   3e-43

>gnl|LJGI|TC63133 similar to UniRef100_A7Q8X9 Cluster: Chromosome chr9 scaffold_65,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_65, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 839

 Score =  174 bits (88), Expect = 3e-43
 Identities = 275/336 (81%), Gaps = 1/336 (0%)
 Strand = Plus / Plus

                                                                       
Query: 94  ttggagctgaacaaagctcgaacgaagaaagcagaggatctcatcgctgcactcgaagcc 153
           |||||||| ||| ||||||| |||||||| || |||||||||||||| ||||||||||||
Sbjct: 341 ttggagctcaacgaagctcgtacgaagaaggctgaggatctcatcgccgcactcgaagcc 400

                                                                       
Query: 154 aggctcggcgatcggagaagggaactcttcgatgaagaaggcagggagattggacgggat 213
           ||| |||| ||||||||| | || || | |||||| || | ||| || | |||| |||||
Sbjct: 401 agggtcggagatcggagacgagagctttccgatgaggacgccagcgatagtggaagggat 460

                                                                       
Query: 214 cgcgagaatcgcctgcaaattccgaccaataatcggtggcggaaattggaaatcccaatc 273
           ||||||  |||||  ||| |||||| ||| ||||||||| ||||  ||||||| ||||||
Sbjct: 461 cgcgagtttcgccatcaacttccgatcaagaatcggtggaggaagctggaaattccaatc 520

                                                                       
Query: 274 ttctcaggtgacgatgcgcttcggttggacacagaggctagagaggtatttctcactgag 333
           |||||||| || |||||  ||||||||||| |||||  | |||||||| ||  |  ||||
Sbjct: 521 ttctcaggggatgatgc-tttcggttggactcagagattggagaggtactttgcgttgag 579

                                                                       
Query: 334 ggaagtttcagaggaagaaaggatgcaagcaacactagtagccttggaaggacgtgctct 393
           ||| |||||||||||||| | ||||||||| ||||| || ||  | |||||| | || ||
Sbjct: 580 ggaggtttcagaggaagagaagatgcaagcgacactcgtggctcttgaaggaagggcact 639

                                               
Query: 394 cagctggttctagtggtgggagcgttgcaacccttc 429
           ||| |||||| | |||||||| || |||||||||||
Sbjct: 640 cagttggttccaatggtgggaacgctgcaacccttc 675