Miyakogusa Predicted Gene
- Lj0g3v0134189.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0134189.1 tr|G7KAB8|G7KAB8_MEDTR Small glutamine-rich
tetratricopeptide repeat-containing protein OS=Medicago
,73.2,0,Tetratricopeptide repeats,Tetratricopeptide repeat;
TPR,Tetratricopeptide repeat; TPR_REGION,Tetratr,CUFF.8211.1
(2109 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP048277 similar to UniRef100_A7NV01 Cluster: Chromosom... 359 5e-98
gnl|LJGI|DC594045 weakly similar to UniRef100_A7NV01 Cluster: Ch... 287 1e-76
>gnl|LJGI|BP048277 similar to UniRef100_A7NV01 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 512
Score = 359 bits (181), Expect = 5e-98
Identities = 283/317 (89%)
Strand = Plus / Minus
Query: 1793 ttgggtcaaatttggtttttatttcaagtaatgatcggttcagacactatgtaacttcac 1852
|||| |||||||||||||| || || || ||||| ||||| ||||| |||||||| ||||
Sbjct: 512 ttggttcaaatttggttttcatctctagcaatgaccggtttagacattatgtaacctcac 453
Query: 1853 ctgggatggctgtggtgctgtttagcaacaaggcaacccacaagcaagtgttgctagtgt 1912
|||| ||| |||||||||| ||| |||||||||||||||| || ||||| ||||| ||||
Sbjct: 452 ctggaatgtctgtggtgctcttttgcaacaaggcaacccagaaacaagtattgctggtgt 393
Query: 1913 tggagcaaaccagcaagagattcccatcagttaatttcctcaaggtggagattgaagacc 1972
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tggaacaaacctgcaagagattcccatcagttaatttcctcaaggtggagattgaagacc 333
Query: 1973 acccctacttagcaaaatcagaaggtgtgacctctgtcccagccttcaaaatatacaaga 2032
| || ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 332 atccttacttggcaaaatcagaaggtgtgaactctgtcccatccttcaaaatatacaaga 273
Query: 2033 acggatcaaaggttaaagagatttcaggcaacaagcacgagttgttagaaagatcagtta 2092
||||||||| ||||||||| ||| |||||||| | ||| | || ||||||| |||||||
Sbjct: 272 acggatcaagggttaaagaaattccaggcaaccaccaccaattactagaaagttcagtta 213
Query: 2093 aattgtacagcagctga 2109
|||||||||||||||||
Sbjct: 212 aattgtacagcagctga 196
>gnl|LJGI|DC594045 weakly similar to UniRef100_A7NV01 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 566
Score = 287 bits (145), Expect = 1e-76
Identities = 442/541 (81%)
Strand = Plus / Plus
Query: 1002 tgattctgtgctcactttccaagctcaggctcttcaaaagcacatgatcaaatgcaatga 1061
||||||||| ||||||||| ||||| ||||||||||||| ||| | | |||||||| |||
Sbjct: 26 tgattctgtactcactttcaaagctgaggctcttcaaaatcaccttaacaaatgcactga 85
Query: 1062 agctcggaaattccatgaatggagagttatactgaaggaaacacagtctgcaatatccgt 1121
||| |||| | | || |||| |||||||| |||||||||||||||||||||||| |
Sbjct: 86 agccaggaacattaaagactggaaggttatactaaaggaaacacagtctgcaatatcctt 145
Query: 1122 aggtgctgattcagctcctcagatctatgctttgcaaagtgaagcattgctaaagctagt 1181
|||||||||||| ||||| | | | ||||||||||||| |||||| ||| | |||||
Sbjct: 146 aggtgctgattctgctccactggtttatgctttgcaaactgaagccttgttgaagcttca 205
Query: 1182 gagatatcaagaggcgtattccatatacgacaaaattccgaaattttcacttgattggtg 1241
||||||||||||| | | | | ||||| ||||| || |||| | |||||||||||
Sbjct: 206 aagatatcaagagggatttgctaactacgagaaaatgccaaaatatgaccttgattggtg 265
Query: 1242 taacaagatttttggcctggctactagtgcctacctcttgatgataggcgcacaggttta 1301
|||||| | ||||| ||||| | || || ||| | ||||||| ||| ||||| |||||
Sbjct: 266 taacaaattatttggtgtggctcccagcgcttacattttgatgacaggagcacaagttta 325
Query: 1302 cttgacagctggcaggttcgaggatgctttgacagcagctcagcaagcagcaagagtcga 1361
|||| |||| || || || ||||| ||| |||||||| |||| ||||||| | | | ||
Sbjct: 326 cttggcagccggaagatttgaggaagctgtgacagcatctcaaaaagcagctaaacttga 385
Query: 1362 cccaagcaacagagaagtgaatgcagtgttaaggagagctagagcagtgacatcagctag 1421
|| | || ||| || |||||||||||| ||||||| ||||||||||| ||||| || ||
Sbjct: 386 tccgaacagcagcgaggtgaatgcagtggtaaggagggctagagcagttacatcggccag 445
Query: 1422 aatgagtggaaatttactcttcaaggcctcaaaattcacggaagcttgtgcggtgtacaa 1481
|||||| || || || ||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 446 aatgagcggtaacttgctcttcaaggcatcaaaattcacggaagcgtgcgcggtatacaa 505
Query: 1482 tgaaggactagaacatgatccccagaactcagttttgctatgcaacagagcagcatgtcg 1541
||||||||||||||||||| || | ||||||||| ||||||| |||||||||||||||||
Sbjct: 506 tgaaggactagaacatgattcctacaactcagttctgctatgtaacagagcagcatgtcg 565
Query: 1542 c 1542
|
Sbjct: 566 c 566