Miyakogusa Predicted Gene
- Lj0g3v0133819.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0133819.1 Non Chatacterized Hit- tr|B9G1H1|B9G1H1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.69,8e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.8178.1
(225 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341466 similar to UniRef100_A7QT50 Cluster: Chromosom... 373 e-103
gnl|LJGI|TC61268 similar to UniRef100_A7QT50 Cluster: Chromosome... 373 e-103
gnl|LJGI|TC59048 similar to UniRef100_A7QT50 Cluster: Chromosome... 115 1e-25
gnl|LJGI|TC70898 similar to UniRef100_A7QT50 Cluster: Chromosome... 103 4e-22
>gnl|LJGI|FS341466 similar to UniRef100_A7QT50 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (58%)
Length = 754
Score = 373 bits (188), Expect = e-103
Identities = 197/200 (98%)
Strand = Plus / Plus
Query: 1 atgagggagcttataaagaaaactagaaccttaactgataaaccgtttggggttggtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atgagggagcttataaagaaaactagaaccttaactgataaaccgtttggggttggtttg 369
Query: 61 gttctggcgtttccttatgaggaaaacttgaaagtgattctggatgaaaaagtagctgtc 120
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 370 attctggcgtttccttatgaggaaaacttgaaaataattctggatgaaaaagtagctgtc 429
Query: 121 ttgcaaatttactggggtgattgtacaagggaattggtagctaaggctcatgctgctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgcaaatttactggggtgattgtacaagggaattggtagctaaggctcatgctgctggg 489
Query: 181 gtcaaagttattcctcaagt 200
||||||||||||||||||||
Sbjct: 490 gtcaaagttattcctcaagt 509
>gnl|LJGI|TC61268 similar to UniRef100_A7QT50 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (93%)
Length = 1496
Score = 373 bits (188), Expect = e-103
Identities = 197/200 (98%)
Strand = Plus / Plus
Query: 1 atgagggagcttataaagaaaactagaaccttaactgataaaccgtttggggttggtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atgagggagcttataaagaaaactagaaccttaactgataaaccgtttggggttggtttg 275
Query: 61 gttctggcgtttccttatgaggaaaacttgaaagtgattctggatgaaaaagtagctgtc 120
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 276 attctggcgtttccttatgaggaaaacttgaaaataattctggatgaaaaagtagctgtc 335
Query: 121 ttgcaaatttactggggtgattgtacaagggaattggtagctaaggctcatgctgctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttgcaaatttactggggtgattgtacaagggaattggtagctaaggctcatgctgctggg 395
Query: 181 gtcaaagttattcctcaagt 200
||||||||||||||||||||
Sbjct: 396 gtcaaagttattcctcaagt 415
>gnl|LJGI|TC59048 similar to UniRef100_A7QT50 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 797
Score = 115 bits (58), Expect = 1e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 atgagggagcttataaagaaaactagaaccttaactgataaaccgtttggggttggtt 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atgagggagcttataaagaaaactagaaccttaactgataaaccgtttggggttggtt 797
>gnl|LJGI|TC70898 similar to UniRef100_A7QT50 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (95%)
Length = 1333
Score = 103 bits (52), Expect = 4e-22
Identities = 151/184 (82%)
Strand = Plus / Plus
Query: 2 tgagggagcttataaagaaaactagaaccttaactgataaaccgtttggggttggtttgg 61
||||| |||| ||| | ||||| ||||||||||| | |||||||||||||||||| | |
Sbjct: 278 tgaggcagctcatacaaaaaacaagaaccttaaccaacaaaccgtttggggttggtgtag 337
Query: 62 ttctggcgtttccttatgaggaaaacttgaaagtgattctggatgaaaaagtagctgtct 121
||||| |||||| ||||||| || |||| || ||| |||| |||||||| | ||||
Sbjct: 338 ttctgatatttcctcatgaggagaatgtgaaggtcattttggaggaaaaagtgggagtct 397
Query: 122 tgcaaatttactggggtgattgtacaagggaattggtagctaaggctcatgctgctgggg 181
| ||| | | |||||||||||| ||||||||||||| ||||||||||| |||||||||
Sbjct: 398 tacaagtatcatggggtgattgtccaagggaattggtcactaaggctcattctgctgggg 457
Query: 182 tcaa 185
||||
Sbjct: 458 tcaa 461