Miyakogusa Predicted Gene

Lj0g3v0133569.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0133569.1 Non Chatacterized Hit- tr|F4IH20|F4IH20_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,44.55,2e-18,seg,NULL,CUFF.8179.1
         (546 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76728 weakly similar to UniRef100_A7Q3P4 Cluster: Chr...  1070   0.0  

>gnl|LJGI|TC76728 weakly similar to UniRef100_A7Q3P4 Cluster: Chromosome chr13
           scaffold_48, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (63%)
          Length = 679

 Score = 1070 bits (540), Expect = 0.0
 Identities = 543/544 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaatggtagctgctgcactcttcactctcttctcgctcttaccgccaccgacctcc 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  atggcaatggtagctgctgcactcttcactctcttctcgctcttaccgccaccgacctcc 139

                                                                       
Query: 61  gccgccgccgccgtagcagcaccttgtgagttcagtttcctcgacggaaacaagctttac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gccgccgccgccgtagcagcaccttgtgagttcagtttcctcgacggaaacaagctttac 199

                                                                       
Query: 121 aattacaccctctcctctcccattcgcaacttccctcacggcgtcctcagtgaagacgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aattacaccctctcctctcccattcgcaacttccctcacggcgtcctcagtgaagacgga 259

                                                                       
Query: 181 ttttacaaagtggctgtgaaccagacaaccctttggtttcagctttgcgatggaatggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttttacaaagtggctgtgaaccagacaaccctttggtttcagctttgcgatggaatggtt 319

                                                                       
Query: 241 ttcaatcatgaccctccaacttgtgctgactgctgggattgtggagggccaacgcgttgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttcaatcatgaccctccaacttgtgctgactgctgggattgtggagggccaacgcgttgt 379

                                                                       
Query: 301 ggaatggagtgcaatgcacttctggcaaacaatattggaggttatcatgtatgcacagcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaatggagtgcaatgcacttctggcaaacaatattggaggttatcatgtatgcacagcc 439

                                                                       
Query: 361 ataggtcttggctcaaaaattgatgttgaagtcattgataagaaaaatccccacattggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataggtcttggctcaaaaattgatgttgaagtcattgataagaaaaatccccacattggt 499

                                                                       
Query: 421 gttattgtcaaaatgtcgagcagtagccctaagtacaactgttcgctggctgtgtctgtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gttattgtcaaaatgtcgagcagtagccctaagtacaactgttcgctggctgtgtctgtg 559

                                                                       
Query: 481 ctttgcaatgtaaacagagtacaagcaccgcacactctggagaaattaggggcttgtaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctttgcaatgtaaacagagtacaagcaccgcacactctggagaaattaggggcttgtaat 619

               
Query: 541 tatg 544
           ||||
Sbjct: 620 tatg 623