Miyakogusa Predicted Gene

Lj0g3v0133499.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0133499.1 tr|F7CK47|F7CK47_MOUSE Microtubule-associated
protein (Fragment) OS=Mus musculus GN=Mtap4 PE=4 SV=1,29.03,3.4,
,CUFF.8156.1
         (394 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343184 weakly similar to UniRef100_UPI0000660791 Clus...   757   0.0  

>gnl|LJGI|FS343184 weakly similar to UniRef100_UPI0000660791 Cluster:
           Polyhomeotic-like protein 2 (hPH2) (Early development
           regulatory protein 2).; n=1; Takifugu rubripes|Rep:
           Polyhomeotic-like protein 2 (hPH2) (Early development
           regulatory protein 2). - Takifugu rubripes, partial (3%)
          Length = 791

 Score =  757 bits (382), Expect = 0.0
 Identities = 391/394 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagttcccccgcattgattgttctaaggcgaagctgaaagcttttgcttctcaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atgaagttcccccgcattgattgttctaaggcgaagctgaaagcttttgcttctcaagct 388

                                                                       
Query: 61  ctgcttaagaagatttggcgtgaacttttgctagggaatcaatcgaagagtcgtttagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctgcttaagaagatttggcgtgaacttttgctagggaatcaatcgaagagtcgtttagtg 448

                                                                       
Query: 121 cgtttttcagaggcagagaaacatatggtctctggtttagggaggtcgcgcgttacacaa 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cgtttttcagaggcagagcaacatatggtctctggtttagggaggtcgcgcgttacacaa 508

                                                                       
Query: 181 ccttcgcttcctgatgatgttctgtttccagaaatttatctatggaagtttggtgagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccttcgcttcctgatgatgttctgtttccagaaatttatctatggaagtttggtgagaag 568

                                                                       
Query: 241 gtgatggatatggagccaaggtatccagatgaggagcttttcccaaaaattgatttaatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gtgatggatatggagccaaggtatccagatgaggagcttttcccaaaaattgatttaatc 628

                                                                       
Query: 301 gactgcaggcttgaagatgatcaggggcgagagggtgaagggatgtctactggtggagaa 360
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 629 gactgcaggcttgaagatgatcaggtgcgagagggtgaagggatgtctactggtggagaa 688

                                             
Query: 361 gtaatggtggagcaaacaacatttaagacgtaga 394
           |||||||||||||| |||||||||||||||||||
Sbjct: 689 gtaatggtggagcatacaacatttaagacgtaga 722