Miyakogusa Predicted Gene
- Lj0g3v0132579.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0132579.1 Non Chatacterized Hit- tr|I1JK94|I1JK94_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,72.54,0,CYT_DCMP_DEAMINASES,APOBEC/CMP deaminase, zinc-binding;
Cytidine deaminase-like,Cytidine deaminase-l,CUFF.8079.1
(1281 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73559 similar to UniRef100_A7PZD5 Cluster: Chromosome... 1348 0.0
gnl|LJGI|BP079545 281 5e-75
>gnl|LJGI|TC73559 similar to UniRef100_A7PZD5 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 853
Score = 1348 bits (680), Expect = 0.0
Identities = 683/684 (99%)
Strand = Plus / Plus
Query: 1 atgcaagcactggattgcattcttccggtgctgcccacaatctcaatcaatgccattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atgcaagcactggattgcattcttccggtgctgcccacaatctcaatcaatgccattcct 229
Query: 61 ccaaagtttgcatcatttgggtcaaccttgagcccctccaagcttcctctggatttgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ccaaagtttgcatcatttgggtcaaccttgagcccctccaagcttcctctggatttgagc 289
Query: 121 ttgagttctggttatgggtgggtgcctagagcacctcgctggaagaggagtagctatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttgagttctggttatgggtgggtgcctagagcacctcgctggaagaggagtagctatggt 349
Query: 181 ggttatgtgtgtgctgccagtggagaagttgatgatgggttttacatcagaaaatgtgta 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 350 ggttatgtgtgtgctgccagtggagaagttgatgacgggttttacatcagaaaatgtgta 409
Query: 241 gagcttgcaaagaaggctttagggtttaccagccccaatccattggtggggtgtgttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gagcttgcaaagaaggctttagggtttaccagccccaatccattggtggggtgtgttatt 469
Query: 301 gtgaaggatgggaaaattgttggtcaagggtttcaccctaaagcagggcagcctcatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtgaaggatgggaaaattgttggtcaagggtttcaccctaaagcagggcagcctcatgct 529
Query: 361 gaggtgtttgctctaagagatgcgggggatttggcagagggtgcgacggcttatgtgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaggtgtttgctctaagagatgcgggggatttggcagagggtgcgacggcttatgtgagt 589
Query: 421 ttggagccttgtaatcattttggtaggactggaccttgttctgaagctctaattcgagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttggagccttgtaatcattttggtaggactggaccttgttctgaagctctaattcgagcc 649
Query: 481 aaagtgaaaaaggtggttattgggatggtggatccaaatcccattgtggcctccaaaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aaagtgaaaaaggtggttattgggatggtggatccaaatcccattgtggcctccaaaggg 709
Query: 541 gtggatagattgagagacgcaggaattgaagttgttgtgggggtagaggcagaactgtgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gtggatagattgagagacgcaggaattgaagttgttgtgggggtagaggcagaactgtgc 769
Query: 601 aagagcctccttgaggcctatattcatcgcatgttgactggaaggcctttccttacattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 aagagcctccttgaggcctatattcatcgcatgttgactggaaggcctttccttacattg 829
Query: 661 agatattctctttctgtcaatggg 684
||||||||||||||||||||||||
Sbjct: 830 agatattctctttctgtcaatggg 853
>gnl|LJGI|BP079545
Length = 390
Score = 281 bits (142), Expect = 5e-75
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 1140 aattttgcctgtttggaatggacatgctgagacagatcctcttctgccatcaaagatatt 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aattttgcctgtttggaatggacatgctgagacagatcctcttctgccatcaaagatatt 331
Query: 1200 agagcaaggacttcaagtggtaaatttacagtccaagacctcagatcagagtgttgtaat 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agagcaaggacttcaagtggtaaatttacagtccaagacctcagatcagagtgttgtaat 271
Query: 1260 tgagggatattttaaattttag 1281
||||||||||||||||||||||
Sbjct: 270 tgagggatattttaaattttag 249