Miyakogusa Predicted Gene

Lj0g3v0131979.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0131979.1 tr|G7J2Y0|G7J2Y0_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_3g072140 PE=4
SV=1,51.55,5e-17,seg,NULL,CUFF.8028.1
         (291 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1;...   111   2e-24

>gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (16%)
          Length = 590

 Score =  111 bits (56), Expect = 2e-24
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                       
Query: 134 gaagtgttatgatacaatgccactcagagattcaactaactcaagagtcaagaagaattc 193
           ||||||||  ||||||||| ||||| ||||||||| ||||||||||||||||||||||| 
Sbjct: 351 gaagtgtttggatacaatgtcactcggagattcaagtaactcaagagtcaagaagaatta 410

                                               
Query: 194 ttgatgatcaatatgatgtaaattctagtgaattgg 229
           |||||||||||||||||| ||| | || ||||||||
Sbjct: 411 ttgatgatcaatatgatgcaaagtgtactgaattgg 446