Miyakogusa Predicted Gene
- Lj0g3v0131909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0131909.1 Non Chatacterized Hit- tr|I1JG31|I1JG31_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21199 PE,61.14,0,FAMILY
NOT NAMED,NULL; helix loop helix domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain;,CUFF.8023.1
(1113 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63791 similar to UniRef100_A7PW94 Cluster: Chromosome... 753 0.0
gnl|LJGI|TC60991 624 e-178
gnl|LJGI|TC79094 similar to UniRef100_A7PW94 Cluster: Chromosome... 242 4e-63
gnl|LJGI|TC76731 similar to UniRef100_A7PW94 Cluster: Chromosome... 74 2e-12
gnl|LJGI|TC62081 60 3e-08
>gnl|LJGI|TC63791 similar to UniRef100_A7PW94 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 689
Score = 753 bits (380), Expect = 0.0
Identities = 380/380 (100%)
Strand = Plus / Plus
Query: 734 agaatggagagctaggaagtcaggttcatacgttaactcatcacttgagtttaccgaaaa 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatggagagctaggaagtcaggttcatacgttaactcatcacttgagtttaccgaaaa 60
Query: 794 cttcagcagagatggctgctatggataagttgcttcagttccctgattctgtaccttgta 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttcagcagagatggctgctatggataagttgcttcagttccctgattctgtaccttgta 120
Query: 854 aaatcagagcaaaacgaggctgtgctactcatcctcgaagcattgccgaacgggtgagaa 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatcagagcaaaacgaggctgtgctactcatcctcgaagcattgccgaacgggtgagaa 180
Query: 914 gaactcggatcagtgaacgaatgagaaaactacaagagcttgttccaaacatggacaagc 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaactcggatcagtgaacgaatgagaaaactacaagagcttgttccaaacatggacaagc 240
Query: 974 aaactaacacatcagacatgttggacttggctgttgattacattaaagatcttcagaaac 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaactaacacatcagacatgttggacttggctgttgattacattaaagatcttcagaaac 300
Query: 1034 aattcaagactctaagtgaaaaaagggcaaagtgcaaatgtgtgagcacgcaaaaggcag 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattcaagactctaagtgaaaaaagggcaaagtgcaaatgtgtgagcacgcaaaaggcag 360
Query: 1094 agacaaacccaattgcttga 1113
||||||||||||||||||||
Sbjct: 361 agacaaacccaattgcttga 380
>gnl|LJGI|TC60991
Length = 883
Score = 624 bits (315), Expect = e-178
Identities = 315/315 (100%)
Strand = Plus / Plus
Query: 1 atggattccaatcagaattatcaactacaacaacagaatcaaagttcttctgggttgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atggattccaatcagaattatcaactacaacaacagaatcaaagttcttctgggttgctt 628
Query: 61 cgttttcgctctgcgccgagttcatttctttcaaatctcacaccttctgttatcaacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cgttttcgctctgcgccgagttcatttctttcaaatctcacaccttctgttatcaacaac 688
Query: 121 gagagattgctcaacagatttgcgagttacggtgcagctgataccaatagcattagcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gagagattgctcaacagatttgcgagttacggtgcagctgataccaatagcattagcatt 748
Query: 181 agctgtaacgatacctctgcagcttcgcctagcttccaagatttcgaagagaacaagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 agctgtaacgatacctctgcagcttcgcctagcttccaagatttcgaagagaacaagcct 808
Query: 241 ttttctaagggcatgaattcgcagcaacagggttatggtggtgctggtgctagtgctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ttttctaagggcatgaattcgcagcaacagggttatggtggtgctggtgctagtgctggg 868
Query: 301 ttaccccctcactat 315
|||||||||||||||
Sbjct: 869 ttaccccctcactat 883
>gnl|LJGI|TC79094 similar to UniRef100_A7PW94 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 944
Score = 242 bits (122), Expect = 4e-63
Identities = 292/349 (83%), Gaps = 6/349 (1%)
Strand = Plus / Plus
Query: 732 tcagaatggagagctaggaagtcaggttcatacgttaactcatcacttgagttt------ 785
|||||||||||||||||||| ||| ||||| || | ||||||||| |||||||
Sbjct: 285 tcagaatggagagctaggaaatcaagttcacacactgactcatcacctgagtttgccttt 344
Query: 786 accgaaaacttcagcagagatggctgctatggataagttgcttcagttccctgattctgt 845
||||| || ||| || || || ||||||||| || |||||| ||||| | ||||||||
Sbjct: 345 accgagaaagtcatcacagttgtttgctatggacaatttgcttgagttcacagattctgt 404
Query: 846 accttgtaaaatcagagcaaaacgaggctgtgctactcatcctcgaagcattgccgaacg 905
||| || |||||||||| |||||| |||||||||||||||||||||||||||| |
Sbjct: 405 tcctaccaatgtcagagcaaagagaggctttgctactcatcctcgaagcattgccgaaag 464
Query: 906 ggtgagaagaactcggatcagtgaacgaatgagaaaactacaagagcttgttccaaacat 965
||||||||||||| |||||||||||||||| || ||| | ||||||||||||||||| |
Sbjct: 465 ggtgagaagaactaggatcagtgaacgaataaggaaattgcaagagcttgttccaaatct 524
Query: 966 ggacaagcaaactaacacatcagacatgttggacttggctgttgattacattaaagatct 1025
||||||||||||| ||| |||| |||||||||||||||| | |||||||| |||||
Sbjct: 525 tgacaagcaaactagcactgcagaaatgttggacttggctgcagtgtacattaatgatct 584
Query: 1026 tcagaaacaattcaagactctaagtgaaaaaagggcaaagtgcaaatgt 1074
||||||||||||||||||||||||||||||| | || || |||||||||
Sbjct: 585 tcagaaacaattcaagactctaagtgaaaaacgagctaaatgcaaatgt 633
>gnl|LJGI|TC76731 similar to UniRef100_A7PW94 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 847
Score = 73.8 bits (37), Expect = 2e-12
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 880 actcatcctcgaagcattgccgaacgggtgagaagaactcggatcagtgaacgaatgaga 939
||||| || |||||| |||| || |||| ||||||||| || ||||| || |||||
Sbjct: 267 actcacccccgaagccttgcagagagggttagaagaactaaaattagtgagcgtatgagg 326
Query: 940 aaactacaagagcttgttccaaacatggacaagcaaactaacacatcagacatgttggac 999
||||||| ||| || || || ||||||||| ||| ||| ||| || ||||||||||||||
Sbjct: 327 aaactaccagatctggtccccaacatggaccagccaaccaacccagcagacatgttggac 386
Query: 1000 ttggctgttgattacat 1016
|||||||| ||||||||
Sbjct: 387 ttggctgtggattacat 403
>gnl|LJGI|TC62081
Length = 1362
Score = 60.0 bits (30), Expect = 3e-08
Identities = 144/182 (79%)
Strand = Plus / Plus
Query: 841 tctgtaccttgtaaaatcagagcaaaacgaggctgtgctactcatcctcgaagcattgcc 900
||||| ||||||||||| |||| ||| |||||| ||| ||||| || ||||| ||||
Sbjct: 1089 tctgttccttgtaaaattcgagccaaaagaggctttgccactcacccaagaagcgttgca 1148
Query: 901 gaacgggtgagaagaactcggatcagtgaacgaatgagaaaactacaagagcttgttcca 960
||| |||| |||||||| ||||| |||||| ||| | ||||| ||| ||| |||||
Sbjct: 1149 gaaagggtaagaagaacacggattagtgaaaaaatcaagaaactggaaggcctttttcca 1208
Query: 961 aacatggacaagcaaactaacacatcagacatgttggacttggctgttgattacattaaa 1020
|| ||||||||||| | |||| |||| |||||||| | ||| ||||| |||||||||
Sbjct: 1209 aaatcagacaagcaaacaagcacagcagatatgttggattcggcagttgagtacattaaa 1268
Query: 1021 ga 1022
||
Sbjct: 1269 ga 1270