Miyakogusa Predicted Gene
- Lj0g3v0131839.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0131839.1 Non Chatacterized Hit- tr|I3SJI7|I3SJI7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,K homology domain-like, alpha/beta; KH_2,K Homology
domain, type 2; 40S RIBOSOMAL PRO,CUFF.8018.1
(285 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO020596 homologue to UniRef100_A7PDZ8 Cluster: Chromos... 565 e-161
gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 565 e-161
gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 319 5e-87
gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 256 6e-68
gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 131 3e-30
>gnl|LJGI|GO020596 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (56%)
Length = 518
Score = 565 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 186
Query: 61 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 246
Query: 121 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 306
Query: 181 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 366
Query: 241 gagaacagtgttgagctctatgctgagaaggttaataacaggggg 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gagaacagtgttgagctctatgctgagaaggttaataacaggggg 411
>gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1079
Score = 565 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 143
Query: 61 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 203
Query: 121 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 263
Query: 181 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 323
Query: 241 gagaacagtgttgagctctatgctgagaaggttaataacaggggg 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagaacagtgttgagctctatgctgagaaggttaataacaggggg 368
>gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1025
Score = 319 bits (161), Expect = 5e-87
Identities = 251/281 (89%)
Strand = Plus / Plus
Query: 1 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 60
|||||||| ||||| ||||||||| |||||||||| ||||| ||||| ||||||||||||
Sbjct: 80 atggcaactcaaatgagcaagaagagaaagtttgtggctgatggcgttttcttcgctgaa 139
Query: 61 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 120
||||||||||||| || || |||||||||||||| || ||||| |||||||||||||||
Sbjct: 140 ctgaacgaggttctcacccgcgagctcgctgaggacggttactccggtgtggaggttagg 199
Query: 121 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 180
||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 200 gttactccggtgaaaactgagatcatcatcagagccactcgaacccaagccgttctaggt 259
Query: 181 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 240
|||||||| ||||| ||||||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 260 gagaagggtaggagaattagggagcttacctcagtggtatcgaagaggttcaagtttcct 319
Query: 241 gagaacagtgttgagctctatgctgagaaggttaataacag 281
|| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 320 gaaaacagtgtggaactctatgctgaaaaggttaacaacag 360
>gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 1176
Score = 256 bits (129), Expect = 6e-68
Identities = 243/281 (86%)
Strand = Plus / Plus
Query: 1 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 60
|||||||||||||| |||||||||||||||||||| || || || || |||||||| |||
Sbjct: 115 atggcaacccaaatgagcaagaagcgaaagtttgtggcggatggagtgttcttcgccgaa 174
Query: 61 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 120
||||||||||||| || ||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 175 ctgaacgaggttctcaccagagagcttgctgaggatggttactccggtgtggaggtcagg 234
Query: 121 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 180
|||||||| | ||||||||||||||||||||||| |||| || || ||||| |||
Sbjct: 235 gttacccctgtccgcaccgagatcatcatcagagccaccagaacccaggctgttcttggt 294
Query: 181 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 240
|||||||||||||| ||||||||||||||||| | || ||||||||||| |||||||||
Sbjct: 295 gagaagggaaggagaattagggagcttacctcaattgtacagaagaggttcaagtttcct 354
Query: 241 gagaacagtgttgagctctatgctgagaaggttaataacag 281
||||| | ||| || ||||||||||||||||| ||||||||
Sbjct: 355 gagaataatgtggaactctatgctgagaaggtgaataacag 395
>gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 903
Score = 131 bits (66), Expect = 3e-30
Identities = 162/195 (83%), Gaps = 8/195 (4%)
Strand = Plus / Plus
Query: 98 gatactctggtgtggaggttagggttaccccgatgaaaaccgagatcatcatcagagcca 157
||||||| ||||||||||||||||| || || |||||| |||||||||||||||||||
Sbjct: 96 gatactcgggtgtggaggttagggtcactccagcgaaaactgagatcatcatcagagcca 155
Query: 158 ctcgaactcaagccgttctcg--------gtgagaagggaaggaggattagggagcttac 209
||||||| || | ||||| | |||||||||||||||| ||||||||||||||
Sbjct: 156 ctcgaacccaggaggttctagacttctaggtgagaagggaaggagaattagggagcttac 215
Query: 210 ctctgtggtgcagaagaggtttaagtttcctgagaacagtgttgagctctatgctgagaa 269
|| ||||| ||||||||| ||||||||||| |||||||| || ||||||||||| ||
Sbjct: 216 cttagtggtatcgaagaggttcaagtttcctgaaaacagtgtagaactctatgctgaaaa 275
Query: 270 ggttaataacagggg 284
||| || ||||||||
Sbjct: 276 ggtcaacaacagggg 290