Miyakogusa Predicted Gene

Lj0g3v0131799.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0131799.1 Non Chatacterized Hit- tr|Q1XG53|Q1XG53_CRYJA
Putative zinc-binding protein OS=Cryptomeria japonica
,36.25,8e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; ZF_BBOX,Zinc finger, B-box; PLATZ,Protein,CUFF.8015.1
         (702 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59094 similar to UniRef100_A3TTX8 Cluster: Aspartyl-t...   107   9e-23

>gnl|LJGI|TC59094 similar to UniRef100_A3TTX8 Cluster: Aspartyl-tRNA synthetase; n=1;
           Oceanicola batsensis HTCC2597|Rep: Aspartyl-tRNA
           synthetase - Oceanicola batsensis HTCC2597, partial (3%)
          Length = 1167

 Score =  107 bits (54), Expect = 9e-23
 Identities = 132/158 (83%)
 Strand = Plus / Plus

                                                                       
Query: 154 aggcactgtaaggaagcccattccctccatcgaaggttccagatataccgatattgctat 213
           |||||||||||||| || |||||||||||  |||| || |||||||||  ||||| ||||
Sbjct: 245 aggcactgtaaggaggctcattccctccacagaagctttcagatatacaaatattcctat 304

                                                                       
Query: 214 caagatgttgttcgccattctgatctgctcaagtattttgactgctccaacattcagact 273
           || |||||| | |||||||| || ||||  |||||||| ||||||   || |||||||||
Sbjct: 305 caggatgttttccgccattccgagctgcagaagtatttcgactgcgagaatattcagact 364

                                                 
Query: 274 tatatatccaacaatgacaagattgtgcacctcaaacc 311
           || ||||||||||| || | ||||||||| ||||||||
Sbjct: 365 tacatatccaacaacgaaaggattgtgcatctcaaacc 402



 Score = 89.7 bits (45), Expect = 2e-17
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                       
Query: 403 ggtggtatttgtaaagaatgtggaaaacatttacaagatgcgcgcaatcatttctgctcc 462
           ||||||| |||| |||||||||||||||| || | ||||| ||| |||   |||||||||
Sbjct: 491 ggtggtacttgtgaagaatgtggaaaacacttgccagatgagcgaaattgcttctgctcc 550

                                                    
Query: 463 attaaatgcaagatctcagtgcttccagtggaaccccaaaa 503
           |||| ||||||||||||||  ||||||||||| ||||||||
Sbjct: 551 attacatgcaagatctcagcacttccagtggatccccaaaa 591