Miyakogusa Predicted Gene

Lj0g3v0131779.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0131779.1 Non Chatacterized Hit- tr|G7JGH1|G7JGH1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,66.67,2e-18,ALMT,Aluminum-activated malate
transporter,CUFF.8014.1
         (257 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67879 similar to UniRef100_A7PCB0 Cluster: Chromosome...    76   1e-13
gnl|LJGI|TC69640 similar to UniRef100_A7PCB0 Cluster: Chromosome...    74   5e-13

>gnl|LJGI|TC67879 similar to UniRef100_A7PCB0 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 809

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 131 taaaatcccaacctcccctcttcttaggctccaacaacagccaagccaacaaca 184
           ||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||
Sbjct: 363 taaaatcacaaccgcgcctcttcttaggctccaacgacagccaagccaacaaca 416


>gnl|LJGI|TC69640 similar to UniRef100_A7PCB0 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 883

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 142/177 (80%), Gaps = 10/177 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaggcttgcagcaaaggtatcaaaagtgctgagagaggttgccggcaacataaggagc 60
           |||||||||||| |||| ||| |||||||||||| |||| |||||  || ||||||||||
Sbjct: 717 atgaggcttgcaacaaatgtaccaaaagtgctgatagagcttgccaacagcataaggagc 658

                                                                       
Query: 61  tgtcatcaatgctctccagaaacactctctgatcatcttca--------tgataccctgc 112
           | |   ||  |||||||||||| |||||  |||||||||||        ||||||| || 
Sbjct: 657 tatgtccatggctctccagaaatactct--gatcatcttcaattcatcatgataccttgt 600

                                                                    
Query: 113 aggacgtcaacgctgccataaaatcccaacctcccctcttcttaggctccaacaaca 169
           ||||| ||||| ||||| ||||||| || | || |||||| ||||||||||||||||
Sbjct: 599 aggacctcaacactgccttaaaatctcagcttcacctctttttaggctccaacaaca 543