Miyakogusa Predicted Gene

Lj0g3v0131239.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0131239.2 CUFF.7973.2
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74621 similar to UniRef100_Q6GLA3 Cluster: Transforme...   490   e-138
gnl|LJGI|BW597436 weakly similar to UniRef100_Q3KRE1 Cluster: Po...   103   6e-22
gnl|LJGI|BW595377                                                      54   5e-07

>gnl|LJGI|TC74621 similar to UniRef100_Q6GLA3 Cluster: Transformer-2 alpha; n=1;
           Xenopus tropicalis|Rep: Transformer-2 alpha - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis),
           partial (8%)
          Length = 823

 Score =  490 bits (247), Expect = e-138
 Identities = 247/247 (100%)
 Strand = Plus / Plus

                                                                       
Query: 64  gcttcctatcgtcaatctcatccaccaccaatgtctacccttttcttcctcactctgcta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcttcctatcgtcaatctcatccaccaccaatgtctacccttttcttcctcactctgcta 415

                                                                       
Query: 124 tgctttacaggcctgagatcagcatctctagactgcagagtagcacttttcccctctgct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgctttacaggcctgagatcagcatctctagactgcagagtagcacttttcccctctgct 475

                                                                       
Query: 184 tctacggtcagtattttccggcgagctgcaaccctacagcgaggtcatcatcccttgctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tctacggtcagtattttccggcgagctgcaaccctacagcgaggtcatcatcccttgctg 535

                                                                       
Query: 244 ccaaacaacagctgtccaagttgctttacaggttgtgtgcctacaccctacgtccctcaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ccaaacaacagctgtccaagttgctttacaggttgtgtgcctacaccctacgtccctcaa 595

                  
Query: 304 tctcctt 310
           |||||||
Sbjct: 596 tctcctt 602



 Score =  119 bits (60), Expect = 1e-26
 Identities = 60/60 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatctacaccctacctcgaaaaccagcttttgattctgctttccaggttgtgtggcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgatctacaccctacctcgaaaaccagcttttgattctgctttccaggttgtgtggcta 310


>gnl|LJGI|BW597436 weakly similar to UniRef100_Q3KRE1 Cluster: Popeye
           domain-containing 3; n=1; Rattus norvegicus|Rep: Popeye
           domain-containing 3 - Rattus norvegicus (Rat), partial
           (8%)
          Length = 460

 Score =  103 bits (52), Expect = 6e-22
 Identities = 58/60 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatctacaccctacctcgaaaaccagcttttgattctgctttccaggttgtgtggcta 60
           |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 272 atgatctacaccctacctcgaaaaccagctattgattatgctttccaggttgtgtggcta 331


>gnl|LJGI|BW595377 
          Length = 477

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 265 tgctttacaggttgtgtgcctacaccctacgtccc 299
           ||||||||||||||| |||||||||||||| ||||
Sbjct: 185 tgctttacaggttgtatgcctacaccctacctccc 219