Miyakogusa Predicted Gene
- Lj0g3v0131009.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0131009.3 Non Chatacterized Hit- tr|I1KXD3|I1KXD3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.52,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.7952.3
(876 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70356 weakly similar to UniRef100_A7QP05 Cluster: Chr... 135 5e-31
gnl|LJGI|TC68937 weakly similar to UniRef100_A7QP05 Cluster: Chr... 105 5e-22
gnl|LJGI|FS319157 weakly similar to UniRef100_A7PCY1 Cluster: Ch... 72 6e-12
gnl|LJGI|AV780762 similar to UniRef100_A7QP05 Cluster: Chromosom... 66 4e-10
>gnl|LJGI|TC70356 weakly similar to UniRef100_A7QP05 Cluster: Chromosome chr1
scaffold_135, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_135, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (43%)
Length = 714
Score = 135 bits (68), Expect = 5e-31
Identities = 158/188 (84%)
Strand = Plus / Plus
Query: 665 ttaatgctgttttcctcctcggtgacacatcattgaattgcatgagatttccaatgtttc 724
||||||| || ||||| || ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 142 ttaatgcggtattccttcttggtgaaacatcattgaatggcatgagatttccaatgtttc 201
Query: 725 ggattgcatactttgtgttgtggacagctacatttgtgatttttcagtggatcatccatg 784
| ||||||| ||| | ||||||| | | ||||||||||||||| |||||||| ||||
Sbjct: 202 gatttgcatattttatcctgtggaccggcatatttgtgatttttcaatggatcatacatg 261
Query: 785 cttgcttttcaattgggtggccttatcccttccttgacttgtcatccaaatatgcccctt 844
| | ||||||| ||||||||||||| |||||||||||||||||| |||||| || |
Sbjct: 262 cctttgtttcaatgtggtggccttatcctttccttgacttgtcatccccatatgcaccct 321
Query: 845 tatggtat 852
| ||||||
Sbjct: 322 tgtggtat 329
Score = 63.9 bits (32), Expect = 2e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 524 ggggttacattttccaaatactttatcagacctgtgcaggtgctgtactgctcactgact 583
||||||| ||||| |||||| | | |||||| ||||||||||||||| ||||||||||||
Sbjct: 1 ggggttatatttttcaaataatgtttcagacgtgtgcaggtgctgtagtgctcactgact 60
>gnl|LJGI|TC68937 weakly similar to UniRef100_A7QP05 Cluster: Chromosome chr1
scaffold_135, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_135, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 755
Score = 105 bits (53), Expect = 5e-22
Identities = 200/249 (80%)
Strand = Plus / Plus
Query: 201 agctggattggtatatgaggatgaagcatggaacacatgtctaataggaatcgatccttc 260
|||||| ||| |||||||||||||| ||||| |||||||| | | |||| |||||
Sbjct: 429 agctgggttgctatatgaggatgaattgtggaatacatgtcttaaaagaattcatcctgt 488
Query: 261 atggctgcttatttatagagtgatttcttttattgtgcttttggctttgattattgctaa 320
||||||||| ||| ||| | ||||||||||||||||||||| |||| | |||| ||
Sbjct: 489 ttggctgcttgcttacagaatagtttcttttattgtgcttttgggtttgctcattggcaa 548
Query: 321 tgtggctgctgaaggagctggcatattttacttctacactcaattgaccttttcgctgct 380
| ||| ||| || |||| ||||||||| ||||||||||| || | |||||| | || |
Sbjct: 549 tatggttgcggatggagttggcatattatacttctacacacagtggaccttcactttggt 608
Query: 381 gacaatttactttgggcttggatcattattctctttatatggatgtttatttaaacaaaa 440
|| |||||||||||||||| ||| || |||||| |||| |||||||| |||||||| |
Sbjct: 609 cactatttactttgggcttgcatcttttttctctatatacggatgtttctttaaacacga 668
Query: 441 taaatttga 449
|||||||||
Sbjct: 669 taaatttga 677
>gnl|LJGI|FS319157 weakly similar to UniRef100_A7PCY1 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 617
Score = 71.9 bits (36), Expect = 6e-12
Identities = 159/200 (79%)
Strand = Plus / Plus
Query: 201 agctggattggtatatgaggatgaagcatggaacacatgtctaataggaatcgatccttc 260
|||||| ||| |||||||||||||| ||||| |||||||| | | |||| |||||
Sbjct: 416 agctgggttgctatatgaggatgaattgtggaatacatgtcttaaaagaattcatcctgt 475
Query: 261 atggctgcttatttatagagtgatttcttttattgtgcttttggctttgattattgctaa 320
||||||||| ||| ||| | ||||||||||||||||||||| |||| | |||| ||
Sbjct: 476 ttggctgcttgcttacagaatagtttcttttattgtgcttttgggtttgctcattggcaa 535
Query: 321 tgtggctgctgaaggagctggcatattttacttctacactcaattgaccttttcgctgct 380
| ||| ||| || |||| ||||||||| ||||||||||| || | |||||| | || |
Sbjct: 536 tatggttgcggatggagttggcatattatacttctacacacagtggaccttcactttggt 595
Query: 381 gacaatttactttgggcttg 400
|| ||||||||||||||||
Sbjct: 596 cactatttactttgggcttg 615
>gnl|LJGI|AV780762 similar to UniRef100_A7QP05 Cluster: Chromosome chr1 scaffold_135,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_135, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 513
Score = 65.9 bits (33), Expect = 4e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 800 ggtggccttatcccttccttgacttgtcatccaaatatgcccctttatggtatgttc 856
||||||||||||| |||||||||||||||||| |||||| || || ||||||||||
Sbjct: 65 ggtggccttatcctttccttgacttgtcatccccatatgcacccttgtggtatgttc 9
Score = 60.0 bits (30), Expect = 2e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 708 gagatttccaatgtttcggattgcatactttgtgttgtggacagctacatttgtgatttt 767
|||||||||||||||||| ||||||| ||| | ||||||| | | ||||||||||||
Sbjct: 247 gagatttccaatgtttcgatttgcatattttatcctgtggaccggcatatttgtgatttt 188
Query: 768 tcagtggatcatccatgc 785
||| |||||||| |||||
Sbjct: 187 tcaatggatcatacatgc 170