Miyakogusa Predicted Gene

Lj0g3v0131009.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0131009.2 Non Chatacterized Hit- tr|D8ST14|D8ST14_SELML
Putative uncharacterized protein OS=Selaginella
moelle,47.06,4e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.7952.2
         (345 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70356 weakly similar to UniRef100_A7QP05 Cluster: Chr...   135   2e-31
gnl|LJGI|AV780762 similar to UniRef100_A7QP05 Cluster: Chromosom...    66   2e-10

>gnl|LJGI|TC70356 weakly similar to UniRef100_A7QP05 Cluster: Chromosome chr1
           scaffold_135, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_135, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (43%)
          Length = 714

 Score =  135 bits (68), Expect = 2e-31
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                       
Query: 134 ttaatgctgttttcctcctcggtgacacatcattgaattgcatgagatttccaatgtttc 193
           ||||||| || ||||| || ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 142 ttaatgcggtattccttcttggtgaaacatcattgaatggcatgagatttccaatgtttc 201

                                                                       
Query: 194 ggattgcatactttgtgttgtggacagctacatttgtgatttttcagtggatcatccatg 253
           |  ||||||| ||| |  ||||||| |  | ||||||||||||||| |||||||| ||||
Sbjct: 202 gatttgcatattttatcctgtggaccggcatatttgtgatttttcaatggatcatacatg 261

                                                                       
Query: 254 cttgcttttcaattgggtggccttatcccttccttgacttgtcatccaaatatgcccctt 313
           | |   |||||||  ||||||||||||| ||||||||||||||||||  |||||| || |
Sbjct: 262 cctttgtttcaatgtggtggccttatcctttccttgacttgtcatccccatatgcaccct 321

                   
Query: 314 tatggtat 321
           | ||||||
Sbjct: 322 tgtggtat 329


>gnl|LJGI|AV780762 similar to UniRef100_A7QP05 Cluster: Chromosome chr1 scaffold_135,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_135, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 513

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 269 ggtggccttatcccttccttgacttgtcatccaaatatgcccctttatggtatgttc 325
           ||||||||||||| ||||||||||||||||||  |||||| || || ||||||||||
Sbjct: 65  ggtggccttatcctttccttgacttgtcatccccatatgcacccttgtggtatgttc 9



 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 177 gagatttccaatgtttcggattgcatactttgtgttgtggacagctacatttgtgatttt 236
           ||||||||||||||||||  ||||||| ||| |  ||||||| |  | ||||||||||||
Sbjct: 247 gagatttccaatgtttcgatttgcatattttatcctgtggaccggcatatttgtgatttt 188

                             
Query: 237 tcagtggatcatccatgc 254
           ||| |||||||| |||||
Sbjct: 187 tcaatggatcatacatgc 170