Miyakogusa Predicted Gene
- Lj0g3v0130899.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0130899.1 Non Chatacterized Hit- tr|C5WSH9|C5WSH9_SORBI
Putative uncharacterized protein Sb01g029480
OS=Sorghu,36.14,7e-17,seg,NULL; PH,Pleckstrin homology domain; no
description,Pleckstrin homology-like domain; PH_DOMAIN,P,CUFF.7944.1
(1206 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598555 similar to UniRef100_A7KP00 Cluster: Oxysterol... 817 0.0
gnl|LJGI|FS323786 homologue to UniRef100_A7P462 Cluster: Chromos... 767 0.0
gnl|LJGI|TC63164 similar to UniRef100_A7NV72 Cluster: Chromosome... 68 1e-10
>gnl|LJGI|DC598555 similar to UniRef100_A7KP00 Cluster: Oxysterol binding protein-like
protein; n=1; Gossypium arboreum|Rep: Oxysterol binding
protein-like protein - Gossypium arboreum (Tree cotton),
partial (72%)
Length = 524
Score = 817 bits (412), Expect = 0.0
Identities = 464/479 (96%), Gaps = 2/479 (0%)
Strand = Plus / Plus
Query: 728 cagagaagctccgttcgcgattatcacaggaaggcattaatgaagcaatcattagtgact 787
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 cagagaagctccgttcgcgattatcgg-ggaaggcattaatgaagcaatcattagtgact 59
Query: 788 gtgagtctattatgctctctgaagtctcttatcttcaaggcaagtttaagtttcttcagc 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtgagtctattatgctctctgaagtctcttatcttcaaggcaagtttaagtttcttcagc 119
Query: 848 agaaacattttatgttgctggacaccttaaaacaactggagacggagaagatagagttgg 907
| |||||||||||||||||||| | | ||| |||||||| || || ||||||||||
Sbjct: 120 acaaacattttatgttgctggagggggtgacaca-ctggagaccganaaaatagagttgg 178
Query: 908 aaactactgtagtggatgaaacaaaggaacgtgagtcatattgtggacaagtgaatagaa 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aaactactgtagtggatgaaacaaaggaacgtgagtcatattgtggacaagtgaatagaa 238
Query: 968 ggtttagtgatttttattctgtgttgtcggagggcagtgctactgattctgtagcagata 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ggtttagtgatttttattctgtgttgtcggagggcagtgctactgattctgtagcagata 298
Query: 1028 atgaaagtcaagatggagcggatgctgaaacagatgatgatgatggagcatattttgaca 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atgaaagtcaagatggagcggatgctgaaacagatgatgatgatggagcatattttgaca 358
Query: 1088 caaacgagattttgtattcggatgccttgagaagtgcttcctatcgaagtcgggaaggta 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 caaacgagattttgtattcggatgccttgagaagtgcttcctatcgaagtcgggaaggta 418
Query: 1148 taggaaatggcagcatatatgatagagattatattctttatgatggtttgcatgggttt 1206
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 taggaaatggcagcatatatgatagagattatattctttatgatggtttgcatgggttt 477
>gnl|LJGI|FS323786 homologue to UniRef100_A7P462 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 732
Score = 767 bits (387), Expect = 0.0
Identities = 387/387 (100%)
Strand = Plus / Plus
Query: 1 atgaatccactgtgctgcattgctccggtttcgatcgatcgggacaggccgaaccctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atgaatccactgtgctgcattgctccggtttcgatcgatcgggacaggccgaaccctgtg 405
Query: 61 gtgacgaaatcgcctggtcagtgtcagttagggctagattcaacagtcaggacgacggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtgacgaaatcgcctggtcagtgtcagttagggctagattcaacagtcaggacgacggtg 465
Query: 121 aactgcgctttcagatcggtctcctccgctcaggactcgtcgctcgctggcggcgactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aactgcgctttcagatcggtctcctccgctcaggactcgtcgctcgctggcggcgactcc 525
Query: 181 gtcaaatcatcaaccgcccacgacgacaacgacgaggagcctcgggattccaaggtgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gtcaaatcatcaaccgcccacgacgacaacgacgaggagcctcgggattccaaggtgttt 585
Query: 241 gctggtggtggaggtagtgtggcggggatactgtacaagtgggtgaactacggcaagggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gctggtggtggaggtagtgtggcggggatactgtacaagtgggtgaactacggcaagggg 645
Query: 301 tggaggtcacggtggtttgtgcttgaagatggtgtgctttcgtattacaagattcatggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tggaggtcacggtggtttgtgcttgaagatggtgtgctttcgtattacaagattcatggg 705
Query: 361 ccggacaagatcttgatgagccctgct 387
|||||||||||||||||||||||||||
Sbjct: 706 ccggacaagatcttgatgagccctgct 732
>gnl|LJGI|TC63164 similar to UniRef100_A7NV72 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1333
Score = 67.9 bits (34), Expect = 1e-10
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 263 cggggatactgtacaagtgggtgaactacggcaaggggtggaggtcacggtggtttgtgc 322
||||||||||| | ||||||||||||||||| || || ||| || |||||||||| ||||
Sbjct: 484 cggggatactgcataagtgggtgaactacggtaaaggatggcggccacggtggttcgtgc 543
Query: 323 ttgaagatggtgtgctttcgtattacaagattca 356
| |||||||||| || || || ||||| |||||
Sbjct: 544 tccaagatggtgttctctcttactacaaaattca 577