Miyakogusa Predicted Gene

Lj0g3v0129869.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0129869.1 Non Chatacterized Hit- tr|K4A8Y1|K4A8Y1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si035337,39.39,6e-19,OS10G0370800 PROTEIN,NULL; FASCIN,NULL; no
description,Glycoside hydrolase, catalytic domain; no des,CUFF.7860.1
         (516 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO008403 similar to UniRef100_A7R1E3 Cluster: Chromosom...   567   e-161
gnl|LJGI|TC64673 similar to UniRef100_A7NV16 Cluster: Chromosome...    54   9e-07

>gnl|LJGI|GO008403 similar to UniRef100_A7R1E3 Cluster: Chromosome undetermined
           scaffold_349, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_349,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (12%)
          Length = 286

 Score =  567 bits (286), Expect = e-161
 Identities = 286/286 (100%)
 Strand = Plus / Plus

                                                                       
Query: 24  agcactgtgtaataagatgggcaaccaattcttctacacaaatttgctattcattttcta 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agcactgtgtaataagatgggcaaccaattcttctacacaaatttgctattcattttcta 60

                                                                       
Query: 84  catctcatgccattattatgtttctgttgctcaaactgaaaattccactttgtcaatcaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  catctcatgccattattatgtttctgttgctcaaactgaaaattccactttgtcaatcaa 120

                                                                       
Query: 144 agctgtgaatcttggaaattggcttgtcatagaaggggcgatgaaaccttctctctttga 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgtgaatcttggaaattggcttgtcatagaaggggcgatgaaaccttctctctttga 180

                                                                       
Query: 204 tggaataaccaacaaagatcttttggatggaactcaagttcagttcatgtctgccaagtt 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggaataaccaacaaagatcttttggatggaactcaagttcagttcatgtctgccaagtt 240

                                                         
Query: 264 acagaagtatctctgcgcagaacatgggggaggatccattgttgtt 309
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagaagtatctctgcgcagaacatgggggaggatccattgttgtt 286


>gnl|LJGI|TC64673 similar to UniRef100_A7NV16 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 902

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 183 gatgaaaccttctctctttgatggaat 209
           |||||||||||||||||||||||||||
Sbjct: 181 gatgaaaccttctctctttgatggaat 207