Miyakogusa Predicted Gene
- Lj0g3v0129839.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0129839.1 Non Chatacterized Hit- tr|I1N608|I1N608_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.61,0,HTH_MYB,Myb
domain; Homeodomain-like,Homeodomain-like; no
description,Homeodomain-like; Myb_DNA-bind,gene.g9926.t1.1
(1023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS347153 131 9e-30
gnl|LJGI|TC64820 similar to UniRef100_A7PMI4 Cluster: Chromosome... 131 9e-30
gnl|LJGI|TC71329 similar to UniRef100_A7PMI4 Cluster: Chromosome... 127 1e-28
gnl|LJGI|TC71947 123 2e-27
gnl|LJGI|TC69643 113 2e-24
gnl|LJGI|TC60856 weakly similar to UniRef100_A7P629 Cluster: Chr... 113 2e-24
gnl|LJGI|TC81393 similar to UniRef100_A7QKP6 Cluster: Chromosome... 92 8e-18
gnl|LJGI|TC82622 UniRef100_Q84PP5 Cluster: Transcription factor ... 78 1e-13
gnl|LJGI|TC79924 similar to UniRef100_A7PZA1 Cluster: Chromosome... 60 3e-08
gnl|LJGI|TC68915 homologue to UniRef100_Q2LME0 Cluster: MYB24; n... 56 4e-07
gnl|LJGI|NP675421 GB|AB108650.1|BAC75673.1 transcription factor ... 52 7e-06
gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome... 52 7e-06
gnl|LJGI|TC62535 similar to UniRef100_A7Q8B3 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|FS347153
Length = 665
Score = 131 bits (66), Expect = 9e-30
Identities = 122/140 (87%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 483 gtcaatggtggagcacacagaagaggatca---agctcactcttgggaacatcaggttca 539
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||
Sbjct: 481 gtcaatggtggagcacacacaagaggatcatgaagctcactcatgggaacatcaaataca 422
Query: 540 gtaccaagtcatgaacccagagaatgtgcaaccacatgtgtttagtgaagctgcgtcctc 599
||||||||||| || || ||||||||||||| |||||||| ||||||||| | |||||
Sbjct: 421 gtaccaagtcaagagcctagagaatgtgcaattgcatgtgttcagtgaagctccatcctc 362
Query: 600 aagctcatcttcatcttcct 619
||| ||||||||||||||||
Sbjct: 361 aagttcatcttcatcttcct 342
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 645 gccacaatcctattcttgccaaacttctcagactcaaat 683
|||||| |||||||||||||||| |||||||| ||||||
Sbjct: 341 gccacagtcctattcttgccaaatttctcagattcaaat 303
>gnl|LJGI|TC64820 similar to UniRef100_A7PMI4 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 715
Score = 131 bits (66), Expect = 9e-30
Identities = 122/140 (87%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 483 gtcaatggtggagcacacagaagaggatca---agctcactcttgggaacatcaggttca 539
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||
Sbjct: 206 gtcaatggtggagcacacacaagaggatcatgaagctcactcatgggaacatcaaataca 265
Query: 540 gtaccaagtcatgaacccagagaatgtgcaaccacatgtgtttagtgaagctgcgtcctc 599
||||||||||| || || |||||||||||| | |||||||||||||||||| | || ||
Sbjct: 266 gtaccaagtcaagagccaagagaatgtgcagctgcatgtgtttagtgaagctccatcgtc 325
Query: 600 aagctcatcttcatcttcct 619
|| |||||||||||||||||
Sbjct: 326 aacctcatcttcatcttcct 345
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 645 gccacaatcctattcttgccaaacttctcagactcaaat 683
|||||| |||||||||||||||| |||||||| ||||||
Sbjct: 346 gccacagtcctattcttgccaaatttctcagattcaaat 384
>gnl|LJGI|TC71329 similar to UniRef100_A7PMI4 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 987
Score = 127 bits (64), Expect = 1e-28
Identities = 120/138 (86%), Gaps = 3/138 (2%)
Strand = Plus / Plus
Query: 483 gtcaatggtggagcacacagaagaggatca---agctcactcttgggaacatcaggttca 539
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||
Sbjct: 371 gtcaatggtggagcacacacaagaggatcatgaagctcactcatgggaacatcaaataca 430
Query: 540 gtaccaagtcatgaacccagagaatgtgcaaccacatgtgtttagtgaagctgcgtcctc 599
||||| ||||| || || ||| |||||||||| |||||||| ||||||||| | |||||
Sbjct: 431 gtacccagtcaagagcctagacaatgtgcaactgcatgtgttcagtgaagctccatcctc 490
Query: 600 aagctcatcttcatcttc 617
||||||||||||||||||
Sbjct: 491 aagctcatcttcatcttc 508
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 645 gccacaatcctattcttgccaaacttctcagactcaaat 683
|||||| |||||||||||||||| |||||||| ||||||
Sbjct: 511 gccacagtcctattcttgccaaatttctcagattcaaat 549
>gnl|LJGI|TC71947
Length = 726
Score = 123 bits (62), Expect = 2e-27
Identities = 121/140 (86%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 483 gtcaatggtggagcacacagaagaggatca---agctcactcttgggaacatcaggttca 539
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||
Sbjct: 256 gtcaatggtggagcacacacaagaggatcatgaagctcactcatgggaacatcaaataca 315
Query: 540 gtaccaagtcatgaacccagagaatgtgcaaccacatgtgtttagtgaagctgcgtcctc 599
||||| |||| || || ||||||||||||| |||||||||||||||||| | |||||
Sbjct: 316 gtacccagtccagagcctagagaatgtgcaattgcatgtgtttagtgaagctccatcctc 375
Query: 600 aagctcatcttcatcttcct 619
||| ||||||||||||||||
Sbjct: 376 aagttcatcttcatcttcct 395
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 645 gccacaatcctattcttgccaaacttctcagactcaaat 683
|||||| |||||||||||||||| |||||||| ||||||
Sbjct: 396 gccacagtcctattcttgccaaatttctcagattcaaat 434
>gnl|LJGI|TC69643
Length = 713
Score = 113 bits (57), Expect = 2e-24
Identities = 120/140 (85%), Gaps = 7/140 (5%)
Strand = Plus / Plus
Query: 483 gtcaatggtggagcacacagaagaggatca---agctcactcttgggaacatcaggttca 539
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||
Sbjct: 250 gtcaatggtggagcacacacaagaggatcatgaagctcactcatgggaacatcaaataca 309
Query: 540 gtaccaagtcatgaacccagagaatgtgcaaccacatgtgtttagtgaagctgcgtcctc 599
||||||||||| || || ||||||||| |||||||||||||||||| | |||||
Sbjct: 310 gtaccaagtcaagagcctagagaatgt----ttgcatgtgtttagtgaagctccatcctc 365
Query: 600 aagctcatcttcatcttcct 619
||||||||||||||||||||
Sbjct: 366 aagctcatcttcatcttcct 385
>gnl|LJGI|TC60856 weakly similar to UniRef100_A7P629 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 1537
Score = 113 bits (57), Expect = 2e-24
Identities = 120/140 (85%), Gaps = 7/140 (5%)
Strand = Plus / Plus
Query: 483 gtcaatggtggagcacacagaagaggatca---agctcactcttgggaacatcaggttca 539
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||
Sbjct: 1049 gtcaatggtggagcacacacaagaggatcatgaagctcactcatgggaacatcaaataca 1108
Query: 540 gtaccaagtcatgaacccagagaatgtgcaaccacatgtgtttagtgaagctgcgtcctc 599
||||||||||| || || ||||||||| |||||||||||||||||| | |||||
Sbjct: 1109 gtaccaagtcaagagcctagagaatgt----ttgcatgtgtttagtgaagctccatcctc 1164
Query: 600 aagctcatcttcatcttcct 619
||||||||||||||||||||
Sbjct: 1165 aagctcatcttcatcttcct 1184
>gnl|LJGI|TC81393 similar to UniRef100_A7QKP6 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 635
Score = 91.7 bits (46), Expect = 8e-18
Identities = 97/112 (86%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 483 gtcaatggtggagcacacagaagaggatca---agctcactcttgggaacatcaggttca 539
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||
Sbjct: 207 gtcaatggtggagcacacacaagaggatcatgaagctcactcatgggaacatcaaataca 266
Query: 540 gtaccaagtcatgaacccagagaatgtgcaaccacatgtgtt-tagtgaagc 590
||||||||||| || || ||| |||||||||| |||||||| |||||||||
Sbjct: 267 gtaccaagtcaagagcctagacaatgtgcaactgcatgtgttctagtgaagc 318
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 645 gccacaatcctattcttgccaaacttctcagactcaaat 683
|||||| |||||||||||||||| |||||||| ||||||
Sbjct: 352 gccacagtcctattcttgccaaatttctcagattcaaat 390
>gnl|LJGI|TC82622 UniRef100_Q84PP5 Cluster: Transcription factor MYB101; n=1; Lotus
japonicus|Rep: Transcription factor MYB101 - Lotus
japonicus, partial (98%)
Length = 1068
Score = 77.8 bits (39), Expect = 1e-13
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 130 gcaggactgaacagatgcggcaagagttgcaggctaagatggactaactac 180
|||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 151 gcaggactgaacaggtgcgggaagagttgcaggctaaggtggactaactac 201
>gnl|LJGI|TC79924 similar to UniRef100_A7PZA1 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 852
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 151 aagagttgcaggctaagatggactaactacctaagacctgat 192
|||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 333 aagagttgcaggctaaaatggacaaactacctcagacctgat 374
>gnl|LJGI|TC68915 homologue to UniRef100_Q2LME0 Cluster: MYB24; n=1; Malus x
domestica|Rep: MYB24 - Malus domestica (Apple) (Malus
sylvestris), partial (38%)
Length = 1263
Score = 56.0 bits (28), Expect = 4e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 301 gacaatgatgtcaaaaactactggaacacaaaactgaggaagaagcttatga 352
||||||||| |||| |||||||||||||| ||||| | ||||||||| ||||
Sbjct: 356 gacaatgatatcaagaactactggaacaccaaactcaagaagaagctcatga 407
>gnl|LJGI|NP675421 GB|AB108650.1|BAC75673.1 transcription factor MYB103 [Lotus
japonicus]
Length = 924
Score = 52.0 bits (26), Expect = 7e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 137 tgaacagatgcggcaagagttgcaggctaagatggactaactacctaagacctgatctca 196
||||||| || || ||||||||||||||||| |||||||| || || || |||||| |||
Sbjct: 137 tgaacaggtgtggaaagagttgcaggctaaggtggactaattatctgaggcctgatatca 196
Query: 197 ag 198
||
Sbjct: 197 ag 198
>gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 1107
Score = 52.0 bits (26), Expect = 7e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 286 ttacctgggagaacagacaatgatgtcaaaaactactggaacacaaaactgaggaagaag 345
||||||||| | ||||| |||||| | || |||||||||||||||| |||| |||||||
Sbjct: 373 ttacctgggcgcacagataatgatataaagaactactggaacacaaggctgaagaagaag 432
Query: 346 ct 347
||
Sbjct: 433 ct 434
>gnl|LJGI|TC62535 similar to UniRef100_A7Q8B3 Cluster: Chromosome chr14 scaffold_63,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_63, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1350
Score = 52.0 bits (26), Expect = 7e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 154 agttgcaggctaagatggactaactacctaagacctga 191
||||||||||| ||||||||||||||||| || |||||
Sbjct: 305 agttgcaggctcagatggactaactacctgaggcctga 342