Miyakogusa Predicted Gene

Lj0g3v0129669.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0129669.1 NODE_50409_length_158_cov_107.607597.path3.1
         (165 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78548 similar to UniRef100_Q9XIE2 Cluster: Pleiotropi...   272   6e-73
gnl|LJGI|AI967680 similar to UniRef100_Q9XIE2 Cluster: Pleiotrop...   242   5e-64

>gnl|LJGI|TC78548 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance
           protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic
           drug resistance protein 8 - Arabidopsis thaliana
           (Mouse-ear cress), partial (10%)
          Length = 712

 Score =  272 bits (137), Expect = 6e-73
 Identities = 140/141 (99%)
 Strand = Plus / Plus

                                                                       
Query: 25  atagcacaggttttcaccgaattaccatatgtgtttgcccaaactacgttttactcactc 84
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2   atagcacaggttttcaccgaaataccatatgtgtttgcccaaactacgttttactcactc 61

                                                                       
Query: 85  attgtgtatgctatggtgagcttcgattggaaagtggagaagttcttctggttcttcttt 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  attgtgtatgctatggtgagcttcgattggaaagtggagaagttcttctggttcttcttt 121

                                
Query: 145 gtcagcttcttctccttcctg 165
           |||||||||||||||||||||
Sbjct: 122 gtcagcttcttctccttcctg 142


>gnl|LJGI|AI967680 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance
           protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic
           drug resistance protein 8 - Arabidopsis thaliana
           (Mouse-ear cress), partial (7%)
          Length = 360

 Score =  242 bits (122), Expect = 5e-64
 Identities = 137/142 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtatgctcctctgccttatgccatagcacaggttttcaccgaattaccatatgtgttt 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 219 atgtatgctcctctgccttatgccatagcacaggttttcaccgaaataccatatgtgttt 278

                                                                       
Query: 61  gcccaaactacgttttactcactcattgtgtatgctatggtgagcttcgattggaaagtg 120
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gccccgactacgttttactcactcattgtgtatgctatggtgagcttcgattggaaagtg 338

                                 
Query: 121 gagaagttcttctggttcttct 142
           || ||||||||||||| |||||
Sbjct: 339 gacaagttcttctggtacttct 360