Miyakogusa Predicted Gene
- Lj0g3v0129619.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0129619.1 Non Chatacterized Hit- tr|I1MQB5|I1MQB5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54732
PE,96.33,0,Ribosomal_S3_C,Ribosomal protein S3, C-terminal; no
description,Ribosomal protein S3, C-terminal; RI,CUFF.7852.1
(330 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 654 0.0
gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 381 e-105
gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 333 4e-91
gnl|LJGI|BP076331 101 3e-21
>gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 1176
Score = 654 bits (330), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Plus
Query: 1 atggaaagtggtgctaagggatgtgaggtaattgtcagtggaaaattgagagcccagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atggaaagtggtgctaagggatgtgaggtaattgtcagtggaaaattgagagcccagagg 552
Query: 61 gccaaatccatgaagttcaaggatgggtacatgatttcttctggccaaccagtcaaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gccaaatccatgaagttcaaggatgggtacatgatttcttctggccaaccagtcaaggat 612
Query: 121 tacattgactctgcagtgagacatgtgctccttagacagggtgttcttggtatcaaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tacattgactctgcagtgagacatgtgctccttagacagggtgttcttggtatcaaggtt 672
Query: 181 aagatcatgctcgattgggatcctaaaggtaaacagggtcccaaaacccccctcccggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aagatcatgctcgattgggatcctaaaggtaaacagggtcccaaaacccccctcccggat 732
Query: 241 attgtcacaatccacactccaaaggaggaagaagaatacaggcctgtggctgttttggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 attgtcacaatccacactccaaaggaggaagaagaatacaggcctgtggctgttttggca 792
Query: 301 aatgatattgaggttcctgttgcttgaaaa 330
||||||||||||||||||||||||||||||
Sbjct: 793 aatgatattgaggttcctgttgcttgaaaa 822
>gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1025
Score = 381 bits (192), Expect = e-105
Identities = 300/334 (89%), Gaps = 4/334 (1%)
Strand = Plus / Plus
Query: 1 atggaaagtggtgctaagggatgtgaggtaattgtcagtggaaaattgagagcccagagg 60
||||||||||| || |||||||||||||| ||||| ||||||||| ||||||| |||||
Sbjct: 458 atggaaagtggagccaagggatgtgaggtgattgttagtggaaaactgagagcacagaga 517
Query: 61 gccaaatccatgaagttcaaggatgggtacatgatttcttctggccaaccagtcaaggat 120
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 518 gccaaatctatgaagttcaaggatgggtacatgatttcttctgggcaaccagtcaaggat 577
Query: 121 tacatt-gactctgcagtgagacatgtgctccttagacagggtgttcttggtatcaaggt 179
|||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 578 tacatttgactctgcagtgagacatgtgctcctcagacagggtgtacttggtatcaaggt 637
Query: 180 taagatcatgctcgattgggatcctaaaggtaaacagggtcccaaaacccccctcccgga 239
|||||| ||||| || |||||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 638 taagattatgcttgactgggatcctaaagggaaacagggtcctaaaactcccctccctga 697
Query: 240 tattgtcacaatccacactccaaaggaggaagaagaataca---ggcctgtggctgtttt 296
|||||| ||||||||| |||| ||||||||||| ||||||| ||||| |||||||
Sbjct: 698 tattgttacaatccactctccgaaggaggaagacgaatacattcagcctgctgctgtttc 757
Query: 297 ggcaaatgatattgaggttcctgttgcttgaaaa 330
||||| |||||| ||||| |||||||| ||||||
Sbjct: 758 ggcaagtgatatcgaggtccctgttgcatgaaaa 791
>gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1079
Score = 333 bits (168), Expect = 4e-91
Identities = 252/280 (90%)
Strand = Plus / Plus
Query: 1 atggaaagtggtgctaagggatgtgaggtaattgtcagtggaaaattgagagcccagagg 60
||||| ||||| || |||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 462 atggagagtggcgcgaagggatgtgaggtcatagtcagtggaaagttgagagcccagaga 521
Query: 61 gccaaatccatgaagttcaaggatgggtacatgatttcttctggccaaccagtcaaggat 120
|| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 522 gctaaatccatgaagttcaaggatggatacatgatttcttctgggcagccagtcaaggat 581
Query: 121 tacattgactctgcagtgagacatgtgctccttagacagggtgttcttggtatcaaggtt 180
||||||||||||||||||||||| ||||| || ||||||||||| |||||||| |||||
Sbjct: 582 tacattgactctgcagtgagacacgtgctactcagacagggtgtacttggtattaaggtg 641
Query: 181 aagatcatgctcgattgggatcctaaaggtaaacagggtcccaaaacccccctcccggat 240
||||||||||| || |||||||||||||| ||||||||||| ||||| || || || |||
Sbjct: 642 aagatcatgcttgactgggatcctaaagggaaacagggtcctaaaactccacttcctgat 701
Query: 241 attgtcacaatccacactccaaaggaggaagaagaataca 280
||||||||||||||||||||||| ||||| || |||||||
Sbjct: 702 attgtcacaatccacactccaaaagaggaggacgaataca 741
>gnl|LJGI|BP076331
Length = 358
Score = 101 bits (51), Expect = 3e-21
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 182 agatcatgctcgattgggatcctaaaggtaaacagggtcccaaaacccccctcccggata 241
||||||||||||||| |||||||||||||||||| |||||| ||| |||||||| | |||
Sbjct: 306 agatcatgctcgattaggatcctaaaggtaaacatggtccccaaa-ccccctcctgaata 248
Query: 242 ttgtcacaatccacactccaaag 264
||||||||||||| |||||||||
Sbjct: 247 ttgtcacaatccatactccaaag 225
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 294 tttggcaaatgatattgaggttcctgttgcttgaaaa 330
||||| ||||||||||||| ||||||||||| |||||
Sbjct: 182 tttggaaaatgatattgagcttcctgttgctcgaaaa 146