Miyakogusa Predicted Gene

Lj0g3v0129539.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0129539.2 tr|B9GY61|B9GY61_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_647445 PE=4
SV=1,91.18,0.000000001,seg,NULL,CUFF.7840.2
         (1197 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC592924 homologue to UniRef100_A7P092 Cluster: Chromos...   333   1e-90

>gnl|LJGI|DC592924 homologue to UniRef100_A7P092 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 595

 Score =  333 bits (168), Expect = 1e-90
 Identities = 180/184 (97%)
 Strand = Plus / Plus

                                                                       
Query: 200 ttcttgttgggtggtttgaagataaaccattctttggagcatccgttggttactttatat 259
           |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1   ttctagttgggtggtttgaagataaaccattctttggagcatctgttggttactttatat 60

                                                                       
Query: 260 ttctttttcttcttgctgggcgggcattgacagttttgctttcaaaccctattgtggtat 319
           ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttctttttcttctagctggacgggcattgacagttttgctttcaaaccctattgtggtat 120

                                                                       
Query: 320 attctccccgtgttttgccagtgtatgtgtatgatgctcatgcagattgtggaaagaatg 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attctccccgtgttttgccagtgtatgtgtatgatgctcatgcagattgtggaaagaatg 180

               
Query: 380 tcag 383
           ||||
Sbjct: 181 tcag 184



 Score =  321 bits (162), Expect = 6e-87
 Identities = 165/166 (99%)
 Strand = Plus / Plus

                                                                       
Query: 381 cagtgtgtcctttctcatgctatatgggattgccctggctactgaaggctggggggtggt 440
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 303 cagtgtgtcctttctcatgctatatgggattgccctggctactgaaggctgggggggggt 362

                                                                       
Query: 441 tgccagtttaaagatttatccaccttttgctggtgcagctgtatcagcaataacacttgt 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgccagtttaaagatttatccaccttttgctggtgcagctgtatcagcaataacacttgt 422

                                                         
Query: 501 tgtttcatttggttttgctgtctcccgtccttgcctaactcttaag 546
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgtttcatttggttttgctgtctcccgtccttgcctaactcttaag 468