Miyakogusa Predicted Gene
- Lj0g3v0129149.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0129149.2 Non Chatacterized Hit- tr|I1M9S9|I1M9S9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20417
PE,63.1,0,seg,NULL; zf-RING_2,Zinc finger, RING-type; RING/U-box,NULL;
ZINC FINGER (C3HC4-TYPE RING FINGER) FA,CUFF.7806.2
(1791 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC595891 327 1e-88
gnl|LJGI|BP073862 similar to UniRef100_A7P4X9 Cluster: Chromosom... 186 3e-46
gnl|LJGI|TC74006 similar to UniRef100_A7P4X9 Cluster: Chromosome... 107 2e-22
gnl|LJGI|TC62674 similar to UniRef100_A7P4X9 Cluster: Chromosome... 96 9e-19
gnl|LJGI|FS337062 weakly similar to UniRef100_A7P4X9 Cluster: Ch... 88 2e-16
>gnl|LJGI|DC595891
Length = 190
Score = 327 bits (165), Expect = 1e-88
Identities = 168/169 (99%)
Strand = Plus / Plus
Query: 96 ggaagatgactctaatgatgtctccaccaaagacctcatcctaggtcctccctttgaagg 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaagatgactctaatgatgtctccaccaaagacctcatcctaggtcctccctttgaagg 60
Query: 156 caagcatgcatcaagctgccccttattgtttcatcctggttcaccttcagttgttacctc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagcatgcatcaagctgccccttattgtttcatcctggttcaccttcagttgttacctc 120
Query: 216 tgagtcaacgaggttcctgcagaggatcctaagctgtattttagacgca 264
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 tgagtcaacgaggttcctgcagaggatcctaacctgtattttagacgca 169
>gnl|LJGI|BP073862 similar to UniRef100_A7P4X9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 335
Score = 186 bits (94), Expect = 3e-46
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 1698 ttgccaggaggaatatattgttgcagatgaagttggcactctacaatgcgagcatatatt 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttgccaggaggaatatattgttgcagatgaagttggcactctacaatgcgagcatatatt 276
Query: 1758 tcatgtggtttgcatacaggagtggctgcggctg 1791
||||||||||||||||||||||||||||||||||
Sbjct: 275 tcatgtggtttgcatacaggagtggctgcggctg 242
>gnl|LJGI|TC74006 similar to UniRef100_A7P4X9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 534
Score = 107 bits (54), Expect = 2e-22
Identities = 108/126 (85%)
Strand = Plus / Plus
Query: 1666 aatgaggataaggatgatatcaaatgctgcatttgccaggaggaatatattgttgcagat 1725
|||||| |||||||||||||||||||| |||| ||||||||||||||| | | |||||||
Sbjct: 95 aatgagaataaggatgatatcaaatgcagcatctgccaggaggaatatgtggctgcagat 154
Query: 1726 gaagttggcactctacaatgcgagcatatatttcatgtggtttgcatacaggagtggctg 1785
||||| || | ||| |||| ||||| | | ||||||||||||||||||| |||||||
Sbjct: 155 gaagtggggagtctgaaatgtgagcacaagtatcatgtggtttgcatacagcagtggcta 214
Query: 1786 cggctg 1791
||||||
Sbjct: 215 cggctg 220
>gnl|LJGI|TC62674 similar to UniRef100_A7P4X9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1194
Score = 95.6 bits (48), Expect = 9e-19
Identities = 102/120 (85%)
Strand = Plus / Plus
Query: 853 aacctcagatgcaacactatatctgacattatcccaactggttgttcatcatcagattca 912
||||||||||||||| |||| ||||| | ||||| ||||||||||| ||||||||||
Sbjct: 700 aacctcagatgcaactctatttctgatgtcatccctgctggttgttcaccatcagattcc 759
Query: 913 acctttaataaaaggaagggaatgataaaaaagagaaactgtgagggggaaagtagttcc 972
||| |||| | | |||| | ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 760 acccttaacagacggaaagatatgataaaaaagagaaattgtgaaggggaaagtagttcc 819
Score = 93.7 bits (47), Expect = 4e-18
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 322 aaaagatttgaaggtgataaacaattgatgggtgaatattctggtaaaagaggcattaat 381
|||||||||||||| ||| | |||||||| |||||||||||||||||||| ||||| |
Sbjct: 100 aaaagatttgaagggaatacgctattgatggatgaatattctggtaaaagagccattagt 159
Query: 382 ggggtggtagtccctagaaaaaatatgggccttttatttagagatactgctaatactaga 441
|| |||||||||||| ||| ||||||| | |||||||||| |||||||||||||
Sbjct: 160 ggaatggtagtccctaaaaaggggatgggccacatgtttagagatagtgctaatactaga 219
Query: 442 gatcgaaatgg 452
|||| ||||||
Sbjct: 220 gatcaaaatgg 230
>gnl|LJGI|FS337062 weakly similar to UniRef100_A7P4X9 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 749
Score = 87.7 bits (44), Expect = 2e-16
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 345 attgatgggtgaatattctggtaaaagaggcattaatggggtggtagtccctagaaaaaa 404
|||||||| |||||||||||||||||||| ||||| ||| |||||||||||| |||
Sbjct: 188 attgatggatgaatattctggtaaaagagccattagtggaatggtagtccctaaaaaggg 247
Query: 405 tatgggccttttatttagagatactgctaatactagagatcgaaatgg 452
||||||| | |||||||||| ||||||||||||||||| ||||||
Sbjct: 248 gatgggccacatgtttagagatagtgctaatactagagatcaaaatgg 295