Miyakogusa Predicted Gene

Lj0g3v0129049.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0129049.1 tr|F6UJ99|F6UJ99_MOUSE Symplekin (Fragment)
OS=Mus musculus GN=Sympk PE=4 SV=1,50,2e-19,Symplekin_C,Symplekin
C-terminal; SYMPLEKIN,NULL; FAMILY NOT NAMED,NULL,CUFF.7795.1
         (420 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78398                                                      333   5e-91

>gnl|LJGI|TC78398 
          Length = 628

 Score =  333 bits (168), Expect = 5e-91
 Identities = 168/168 (100%)
 Strand = Plus / Plus

                                                                       
Query: 253 gaagtacaatctacccttcccaggtctgtactggttcttctgggaattgtttctgacgca 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   gaagtacaatctacccttcccaggtctgtactggttcttctgggaattgtttctgacgca 64

                                                                       
Query: 313 cagatttcaaatcaggcgcaaactagtcaaacacagaccgatgagacaagcctctcagat 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  cagatttcaaatcaggcgcaaactagtcaaacacagaccgatgagacaagcctctcagat 124

                                                           
Query: 373 aaggacacagtaacagaaaaatctaaagaatcttctatagcgagctaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aaggacacagtaacagaaaaatctaaagaatcttctatagcgagctaa 172