Miyakogusa Predicted Gene

Lj0g3v0129019.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0129019.1 tr|G7KIW0|G7KIW0_MEDTR Disease resistance-like
protein GS6-2 (Fragment) OS=Medicago truncatula GN=MT,50,2e-19,
,CUFF.7791.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TI...   357   3e-98
gnl|LJGI|BP073543                                                     119   1e-26

>gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1;
           Medicago truncatula|Rep: TIR; AAA ATPase - Medicago
           truncatula (Barrel medic), partial (11%)
          Length = 581

 Score =  357 bits (180), Expect = 3e-98
 Identities = 225/240 (93%)
 Strand = Plus / Plus

                                                                       
Query: 10  gttgtccattcttctatcgcagatgacacaacatcagatggccttaaaaatgtgttggtg 69
           |||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 295 gttgtccattcttctaccacagatgacataacatcagatggccttcaaaatgtgttggtg 354

                                                                       
Query: 70  ataaattgcacaaagaacaccattcagctatataagaggaatgcattagcctcctttgaa 129
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 355 ataaattgcacaaagaacacaattcagctctataagaggaatgcattagcctcctttgaa 414

                                                                       
Query: 130 gatgaagagtggcagagagtggtatcaaatattgaacctggtaacaaagtaaaggtggta 189
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| 
Sbjct: 415 gatgaagagtggcagagagtagtatcaaatattgaaccgggtaacaaagtaaagatggtg 474

                                                                       
Query: 190 gttgtttttgagaaccgattcactgtgaggaagacaacaatttatcttatatatgttgaa 249
           ||||||||||||||| |||||||||||| |||||||||| |||||||| |||||| ||||
Sbjct: 475 gttgtttttgagaacggattcactgtgaagaagacaacagtttatcttgtatatgatgaa 534


>gnl|LJGI|BP073543 
          Length = 395

 Score =  119 bits (60), Expect = 1e-26
 Identities = 63/64 (98%)
 Strand = Plus / Minus

                                                                       
Query: 204 ccgattcactgtgaggaagacaacaatttatcttatatatgttgaaccaattgaggagaa 263
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ccgattcactgtgaagaagacaacaatttatcttatatatgttgaaccaattgaggagaa 336

               
Query: 264 aatg 267
           ||||
Sbjct: 335 aatg 332