Miyakogusa Predicted Gene
- Lj0g3v0128849.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0128849.1 Non Chatacterized Hit- tr|G7IDT2|G7IDT2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,80.27,0,Sec15,Exocyst complex subunit Sec15-like; seg,NULL;
SEC15,Exocyst complex subunit Sec15-like,CUFF.7775.1
(1573 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB828526 weakly similar to UniRef100_A7PTC2 Cluster: Ch... 238 9e-62
gnl|LJGI|AV767854 similar to UniRef100_A7PTC2 Cluster: Chromosom... 88 2e-16
gnl|LJGI|AV411224 weakly similar to UniRef100_A7PTC2 Cluster: Ch... 74 3e-12
>gnl|LJGI|CB828526 weakly similar to UniRef100_A7PTC2 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 539
Score = 238 bits (120), Expect = 9e-62
Identities = 333/404 (82%)
Strand = Plus / Plus
Query: 364 tctactctaaggcaatatggatatgatataggtccacttcttgatgttcttgacaattgt 423
|||||||| || |||||||||||||| ||| | ||||||||||||| ||||| | |
Sbjct: 104 tctactcttagacaatatggatatgagataagcacacttcttgatgtgcttgatagcagc 163
Query: 424 cgcgacaaataccatctacttcttttggaagaatgtaggcaacaaactgttgatgttatt 483
| | ||| ||||| | ||||||||||| |||||| ||||||||| |||||||||| ||
Sbjct: 164 catggcaagtaccaccagcttcttttggatgaatgtcggcaacaaattgttgatgttctt 223
Query: 484 tgcaatgactcttatgagcagatggtgataaaaaaggacagtgattatgaaaacaatgtt 543
|||||||||| ||||| || ||| | || |||||||| | ||| ||||| || | ||
Sbjct: 224 ggcaatgactcatatgaccaaatgataatgaaaaaggaaactgactatgagaattgtatt 283
Query: 544 cttgcatttaaccttcaaacttcagatattatgcctgcttttccttatgtagcaccattc 603
|| ||||||| |||||||| |||||||||||||| ||||||| ||||| |||||||||
Sbjct: 284 ctgtcatttaatcttcaaacatcagatattatgccaccttttccatatgttgcaccattc 343
Query: 604 tcctccatggtccctgatgcttgtcacattgtgagatccttcatcaaagcctctgttgat 663
||||||||||| || ||||| |||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 344 tcctccatggtacccgatgcctgtcgcattgtgagatcctttatcaaaggctctgttgat 403
Query: 664 tacttgtgccacggtgtgcgatccagtttctttgagattgtgaggaagtatttggacaag 723
||||||| | || | | | | ||||||||| |||||||||||||||||||||||
Sbjct: 404 tacttgtcttatgggatacacacgaatttctttgatcttgtgaggaagtatttggacaag 463
Query: 724 ttcctgatcgaagtattgaatgaaacattacttgatacaatcaa 767
||| |||| || ||||| |||| |||||||||||||||||||||
Sbjct: 464 ttcttgattgacgtattaaatgtaacattacttgatacaatcaa 507
>gnl|LJGI|AV767854 similar to UniRef100_A7PTC2 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 401
Score = 87.7 bits (44), Expect = 2e-16
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 1423 ttggattacaagaaggtggctagcatttgtgataaattcaaggattctccagatgggatc 1482
||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 396 ttggattacaagaaggtggctgctatctgtgacaaattcaaggattccgcagatgggatc 337
Query: 1483 tttggaagcctt 1494
||||||||||||
Sbjct: 336 tttggaagcctt 325
>gnl|LJGI|AV411224 weakly similar to UniRef100_A7PTC2 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 418
Score = 73.8 bits (37), Expect = 3e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1054 gactacatgaatgaagtggtgttttatcttgattcccttatgtcaacagcacaacaaatt 1113
|||||||| |||||||| | |||| |||||||| || |||| ||||||||||||||
Sbjct: 189 gactacatacatgaagtgatcatttaccttgattctattttgtccccagcacaacaaatt 248
Query: 1114 ttacccttagatgccatgtacaaagtcgg 1142
|||||||| ||||| ||||||||||||||
Sbjct: 249 ttacccttggatgctatgtacaaagtcgg 277