Miyakogusa Predicted Gene
- Lj0g3v0128759.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0128759.1 tr|A9S5H1|A9S5H1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162953,27.75,2e-16, ,CUFF.7784.1
(918 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74862 similar to UniRef100_A7QYZ5 Cluster: Chromosome... 831 0.0
gnl|LJGI|FS355074 similar to UniRef100_A7R136 Cluster: Chromosom... 172 2e-42
>gnl|LJGI|TC74862 similar to UniRef100_A7QYZ5 Cluster: Chromosome undetermined
scaffold_260, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_260,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 606
Score = 831 bits (419), Expect = 0.0
Identities = 419/419 (100%)
Strand = Plus / Plus
Query: 1 atggatttcaacaacaatgacaaggagccatggaattggcatggggagggttatactctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atggatttcaacaacaatgacaaggagccatggaattggcatggggagggttatactctc 247
Query: 61 caagagacttctaattttgaaatttcggaagagctgtggaatgacgtgcctcaaaatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 caagagacttctaattttgaaatttcggaagagctgtggaatgacgtgcctcaaaatgaa 307
Query: 121 gaagatctttcctacatgtttgatgatgaaactacccctgttaaggctgttggtgatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaagatctttcctacatgtttgatgatgaaactacccctgttaaggctgttggtgatttg 367
Query: 181 gcatataatggtgattcaaataacgtgccaaaggaactagaggaatgcagggagacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gcatataatggtgattcaaataacgtgccaaaggaactagaggaatgcagggagacttct 427
Query: 241 caagtcaagaggcggcgcatgctacagtttaacagccaagatagggatcactctctatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caagtcaagaggcggcgcatgctacagtttaacagccaagatagggatcactctctatca 487
Query: 301 aaggaggagatgactgcggcatatttgaaaaatgggaaggaggacgccatgaaggatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aaggaggagatgactgcggcatatttgaaaaatgggaaggaggacgccatgaaggatatt 547
Query: 361 ttccctgaagtgtccccatgggtgtctggggcatcatcagaatgtgcattaggaaatgc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttccctgaagtgtccccatgggtgtctggggcatcatcagaatgtgcattaggaaatgc 606
>gnl|LJGI|FS355074 similar to UniRef100_A7R136 Cluster: Chromosome undetermined
scaffold_336, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_336,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 466
Score = 172 bits (87), Expect = 2e-42
Identities = 191/225 (84%), Gaps = 3/225 (1%)
Strand = Plus / Minus
Query: 686 ctgtggcctatccatttgccttcattaaacccagtggtgcgcatggagatgtaactctga 745
|||| ||||||||||||||||||||||||||||||||| | |||||||||| |||||||
Sbjct: 466 ctgtagcctatccatttgccttcattaaacccagtggtactgatggagatgtcactctga 407
Query: 746 aggaaattaaccagcgcattcgaactccacctccttcaaagtcaaagcaaaacagtgaag 805
||||||| || |||||||||| | |||| ||||||| ||||||||| ||| ||||
Sbjct: 406 aggaaataaatcagcgcattcagtgttcaccgacttcaaaaccaaagcaaaccagggaag 347
Query: 806 atccatctgcttatcccaaatcagccttctcagggaagcctgtggttggtaaaacaaaaa 865
||||| || |||||||||||||| |||||||||||||| ||||| |||| ||||
Sbjct: 346 atccaaaa---taccccaaatcagccttttcagggaagcctgtagttggaaaaatgaaaa 290
Query: 866 ttcgcactgaaggagggaaaggaagcatcacaattatgagaacta 910
||| ||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 289 ttcacactgaaggggggaaaggtagcatcactattatgagaacta 245